Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_C6218 |
Symbol | |
ID | 3607845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007336 |
Strand | + |
Start bp | 377655 |
End bp | 381185 |
Gene Length | 3531 bp |
Protein Length | 1176 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637689087 |
Product | indolepyruvate ferredoxin oxidoreductase |
Protein accession | YP_293384 |
Protein GI | 72384030 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCAGC GCGCAAACGA TAACCATTTT CTTACCGATG AAAACTACCG ACTGGAGGAT CGCTATCTGC GCGCTTCCGG GCGGGTATTT CTCACGGGTA CACAGGCGCT GGTGCGCATT CTGTTGGAAC AGGCTCGTGC CGACCGCGTC GCCGGATTGC ACACCGGTGG TCTGGTTTCT GGCTATCGTG GGTCTCCGCT TGGCGGTCTG GATCAAGAGT TGTGGCGACA GCGAAAAATG CTCGCTGAGC ATGATATTCG CTTCGAGCCT GGGCTGAACG AAGACCTTGG GGCTACGATG CTGTGGGGGG CACAGCAGAT TGACGCCTTT CCGGGGAAGC GGGTCGAAGG CGTATTCTCG ATGTGGTATG GCAAGGGGCC TGGGGTAGAT CGCACCGGCG ACGTATTCCG CAATGCCAAT ATCCTCGGCA CGTCGCGCCA CGGTGGCGTG CTTGCGATTG CAGGCGATGA CCACGCGGCG CAGTCTTCGA TGTTCCCGCA CCAGACGGAC CATGTGTTCG AGGGGGCGAT GATGCCTATT CTCTTTCCGT CGTCTGTGGA GGAGTATATT GAGTTCGGCC TGTTCGGCTA CGCGCTCTCA CGCTTTTCCG GATTGTGGGT TGCGTTCAAG GCAATTACCG AGACGGTGGA GAGTGGCAGG TCGATGACGC TGCCCGGCTC AGGCCTGGGC CGTGGTTTTG GTATTCCCAC CGATATCGAA ATACCCGAGC GAGGTTTCGG CCTCGATACG GCTATACGGT GGCCGGCGGA GCGCGCCGAG CTGGAGCGCC GCTTGATTGA GGAACGGCTG CCGGCCGCAC TTGCCTTTGC GCGCGCCAAT CCGATTGATC GCACTGTGAT ACGGCCGGCC ATTGCCAAGG TCGGGATCAT TACCGTGGGC AAGGCTCATC TCGATGTGAT GGCGGCGCTG CGACGCCTTG ATCTTGATAC GGCCGCGCTG GAGTTCCTCG GTATCGGCAT CTATAAGGTT GGCATGTCCT GGCCGCTTGA GGGGAAAGGG GTGGAGTGCT TTTGCGCGGG CATGCAGGCG CTCATCGTGG TGGAAGAAAA GCGCAGCATG GTCGAGCAGC AGATCCAGAC GTTGCTGTAC AACCACGCGG CGCAAGACCG TCCCGCGGTA TATGGCAAAC ATGGGCCTGA CGGTGAAAAA TGGTTGCCCG CAACGATGGA GTTTTCTCCT GAGCAGGTAG CTGGCGTACT GCGCCGGTTC TTCGGCGCGC AGGGCATTGT TGCTACAGAG GCGCGAGGGA CGCAACGTTC AGGTGCTGAC GCGGGCGGCA GTTCACGGAT GATTCCAATC CACCCTGCAG AGCAGGTTCT GTCGCGCAAA CCATTCTTCT GTTCCGGCTG CCCGCATAAC AACTCCACGC GTCTGCCAGA CGGTTCATAT GCCGCGGCCG GCATCGGATG CCACATCATG GCGCTGGGGC AGCGTGACCG CACCGCTACC TTCTGTCAGA TGGGCGGCGA GGGTGTGCAA TGGGTCGGCC TGTCGACCTT TTCCAAGATG CCGCATCTGT TCGTTAACCT GGGTGATGGG ACTTACCAGC ATTCGGGCAG CCTGGCTATT CGGCAGGCTG TGGCGGCTGG GACTGCCGTG ACTTACAAGA TCCTCTTCAA TGATGCGGTC GCGATGACCG GCGGGCAGCC GACCGAAGGG GGCCTGACAG TGCCGAAGAT CGCGGCTCAG CTCGTGGCCG AAGGGGTGAA AGAGATCGTG GTGGTCTCGG AGGAGCCTGC GCGATATCGG TCCATAAGCG AGATGCCGGC CAATGTGGCA GTGGTGAACC GTAGCGAACT CGACACCGTT CAGAGGCGTC TGCGTGAGTA TCCTGGTGTA TCAGCGATCA TCTATGACCA GACCTGTGCT GCCGAGAAGC GACGCCGACG CAAGCGCGGG TCGCTGGCAA CACCCAAACG GCACATCGCT ATTCATCCTG CCGTGTGCGA GGGGTGTGGA GACTGCTCGG CGCGTTCCGG TTGTATTGCC GTTGAACCGC TGGAGACAGA GCTTGGCCGC AAGCGCATCG TCAACCAGTC GGCGTGCAAC AAGGACATGA CTTGCGTCCA AGGCTACTGT CCGAGCTTTG TCACCATCGA AGGGGAGCGG GCAAGCTCCG TTCAGTCCGG CACGCTGCGG CGACTGGAAG CCGAGTGGGG GCTCGCGTTG CCGCCGCCGG CCTCAACGTC GCCCGAGTTG CTGCAGCACT GCGGCGTGCT TGTGGCGGGG ATTGGAGGAA CGGGCATTGT CACCGTCGGC GCGATTCTCG CTATGGCGGC GCATTTGGAA GGTCGTGGTG CATCGACGCT CGATTTCACG GGCTTGGCCC AGAAGAATGG GGCTGTGGTC AGCCACATTC AGCTGGCCGA GTCGCCCGCC CACATTGCCA CGGCACGCAT CGAGCCGAAG AGCGCCAACC TGTTGCTCGG CTGCGATGCT GTGGTTGCGG CCTCGCCAGA CGTGCTGGCA AGGCTTCGTC CAGGCTCGGC GCATGCTGTG GTGGAAACCG CAATGACACC GACGGCGGAT TTTGTTGGCG ATGGGGATAT GCAGCTTTCA CTGCCAGCGC ATCGGCATGC AATTGAACGG GCGATTGGCG AGGGCAGGGC CGAATTCCAT GACTGGAGCG CCGCTGCGCA AACAATTTTC GGCGACACCT TCGCGGCCAA TCTGATGTTG GTGGGCCATG CCTTCCAGCG TGGTTGGCTG CCGGTTTCGG AGATCGCTAT CCAGCGTGCC ATCGAACTCA ATGGCGCATC CGTCGAGGCA AACCGGCGGG CATTCCTGTG GGGGCGGATT CTGGCCCATG ACCCGACGGC GTTGCAGAAG GCGGGACAAG CTGACATTGC GGCAAGTGAG CCATTCACCA TCGGAGGATT CGTCGGTGCT CGCGCGCAAG AACTCGCTGC CTACCAGAAT GCCGCATATG GACGGCGGTA CGCTGTCCTC GTGGACCGTG TCGCCCGTGC GGAAGGTCAA ATCTCTGATG CGCCGGGTGT GTTGACCGAA GGCGTTGCAC GCAACTATTT CAAGGTCTTG GCTTACAAGG ATGAGTACGA AGTGGCGCGC CTTCACACCG ATCCTGTGGC GTCGCGAGCC ATGATGCAGG GCTTTGCACC CGGAGCGAAG CGAGTCTTCC ATATGGCGCC CCCGATACTG GCGCGATCCG GTGGTCCCGG TGGAATGCGT CGCAAGATCG CTTTGAAGGG CTGGTTCATC GTGCCGCTGA TGCATGTGCT GCGGCACGGC AAGGTACTGC GTGGAACGGT GCTCGATCCT TTCGGCCTGC AGGCCGACCG TCAGCTGGAG CGCAGGCTGA TTACTGAATT CGAGCGGGAT GTCGATGCGG TCCTCGAGCG ACTGTCGCCG AAGACTCTGG ATGACGCTGT CGCGTTGGTT CGCTTGTACG AGAAGGTCCG GGGATTCGGG CACATCAAGA TGCGTCATTT CGACGATGCG AGGTCGGAGT TCGAACGCCT TCGTGAGAAG CTCGGACGCA GTGAGGGCTG A
|
Protein sequence | MNQRANDNHF LTDENYRLED RYLRASGRVF LTGTQALVRI LLEQARADRV AGLHTGGLVS GYRGSPLGGL DQELWRQRKM LAEHDIRFEP GLNEDLGATM LWGAQQIDAF PGKRVEGVFS MWYGKGPGVD RTGDVFRNAN ILGTSRHGGV LAIAGDDHAA QSSMFPHQTD HVFEGAMMPI LFPSSVEEYI EFGLFGYALS RFSGLWVAFK AITETVESGR SMTLPGSGLG RGFGIPTDIE IPERGFGLDT AIRWPAERAE LERRLIEERL PAALAFARAN PIDRTVIRPA IAKVGIITVG KAHLDVMAAL RRLDLDTAAL EFLGIGIYKV GMSWPLEGKG VECFCAGMQA LIVVEEKRSM VEQQIQTLLY NHAAQDRPAV YGKHGPDGEK WLPATMEFSP EQVAGVLRRF FGAQGIVATE ARGTQRSGAD AGGSSRMIPI HPAEQVLSRK PFFCSGCPHN NSTRLPDGSY AAAGIGCHIM ALGQRDRTAT FCQMGGEGVQ WVGLSTFSKM PHLFVNLGDG TYQHSGSLAI RQAVAAGTAV TYKILFNDAV AMTGGQPTEG GLTVPKIAAQ LVAEGVKEIV VVSEEPARYR SISEMPANVA VVNRSELDTV QRRLREYPGV SAIIYDQTCA AEKRRRRKRG SLATPKRHIA IHPAVCEGCG DCSARSGCIA VEPLETELGR KRIVNQSACN KDMTCVQGYC PSFVTIEGER ASSVQSGTLR RLEAEWGLAL PPPASTSPEL LQHCGVLVAG IGGTGIVTVG AILAMAAHLE GRGASTLDFT GLAQKNGAVV SHIQLAESPA HIATARIEPK SANLLLGCDA VVAASPDVLA RLRPGSAHAV VETAMTPTAD FVGDGDMQLS LPAHRHAIER AIGEGRAEFH DWSAAAQTIF GDTFAANLML VGHAFQRGWL PVSEIAIQRA IELNGASVEA NRRAFLWGRI LAHDPTALQK AGQADIAASE PFTIGGFVGA RAQELAAYQN AAYGRRYAVL VDRVARAEGQ ISDAPGVLTE GVARNYFKVL AYKDEYEVAR LHTDPVASRA MMQGFAPGAK RVFHMAPPIL ARSGGPGGMR RKIALKGWFI VPLMHVLRHG KVLRGTVLDP FGLQADRQLE RRLITEFERD VDAVLERLSP KTLDDAVALV RLYEKVRGFG HIKMRHFDDA RSEFERLREK LGRSEG
|
| |