| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6104 |
|---|
| Symbol | |
|---|
| ID | 3607410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | - |
|---|
| Start bp | 245464 |
|---|
| End bp | 246333 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637688989 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_293286 |
|---|
| Protein GI | 72383932 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.236954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCAT CGCGGGCGGG CTATCGGCCC GCTGCGGCAG GTGTTCATGC CGAGACACTG
GAAAAGGTTG CTGCGACGGG CAGGATTACC GTCGCTTATC GTGAGGCGGC GGTTCCCTTT
AGTTATCTGC TTGGCCCGCA TAAAGCCGTT GGATTTTCAG TCGACCTGAC GGAAGCCATC
GTTGACGATG TGCGAAGCCG GCTGAAGCAG CCTGACCTCA AAGTCGAATA CATCCCAGTG
ACCGGGCAGA ATCGTATTCC GTTGCTGGTC AACGGTACCT ATGATTTGGA GTGTGGTTCG
ACCACCAATA CCAGCATGCG TGGCAAGGAG GTGGCATTCT CGATCAATTT CTTCTACGCG
GGAACTCGAC TGCTGACCAA ACGCGATTCT GGTATTAATG GCTACGCTGA TCTGGCGAAG
AAGACAGTAG CCAGCACCGC CGGTAGCACG AACGAGAAGG TGGTGAGAAA GCACGGCGCT
GACAACAATA TCGACGTCCA GATGATTTCC GGCAAGGACT ATGCAGACGC GCTGCAACTC
GTGGAAAATG ATCGCGCGTC AGCGCTTGCC TTGGATGACG TTCTGCTATT CGGCTTGCGT
GCCAATTCAA GGAACCCTTC TTCGCTTGAG ATCGTGGGCG ATACGCTTCA GGTGGAACCA
TATGCTTGCA TGGTCCGTAA AGACGATGCG GAGTTCAAGA AGCTGGTGGA TGGGACCATA
ACGCGACTGA TGAAATCGGG AGAATTTTCT CGGCTCTATA AGAAATGGTT TGAATCTCCG
ATCCCACCTG CCGGAGTGAA TCTGAATATG CCGATGAGCG AGCCGTTGCG AGCAAACATC
AAGACACGTA GCGATAAACC GGCGCAGTGA
|
|---|
| Protein sequence | MPSSRAGYRP AAAGVHAETL EKVAATGRIT VAYREAAVPF SYLLGPHKAV GFSVDLTEAI
VDDVRSRLKQ PDLKVEYIPV TGQNRIPLLV NGTYDLECGS TTNTSMRGKE VAFSINFFYA
GTRLLTKRDS GINGYADLAK KTVASTAGST NEKVVRKHGA DNNIDVQMIS GKDYADALQL
VENDRASALA LDDVLLFGLR ANSRNPSSLE IVGDTLQVEP YACMVRKDDA EFKKLVDGTI
TRLMKSGEFS RLYKKWFESP IPPAGVNLNM PMSEPLRANI KTRSDKPAQ
|
|---|
| |