Gene Reut_C6017 details

Gene Information

• Locus tag: Reut_C6017
• ID: 3607479
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007336
• Strand: +
• Start bp: 145347
• End bp: 147362
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637688908
• Product: PAS:GGDEF
• Protein accession: YP_293205
• Protein GI: 72383851
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCCGCT GGTCGCTAAA ATCCCGGGTA GTCGCCTCGA CCGTCGTTGT GGTTCTTCTC 
CTCGCGGTCC TGCTGATACT GGTCGCACGT CATTACGTCT TCGCAAACCT AGAGGATTCC 
CTGCAGGCCC AGCAGGACGC ACAGGTCAGA CTGGTCGCTG AGCAACTCGA CGACAAATTC 
GAAGTACGTA CTGTCATCCT ACGCCGGCTT GCCGAGCATC TTGCCCCGCT GTTGGACCGT 
GGTCCAGCGG AACTGAAACG AGTCGCTGAG GAGGCCGCTC CGGCCCCTGA GTTGTTCGAT 
TCGGTTTTTC TTGCTTGGCC GGACGGTAAG CGGGCATTCG ATACCAGGAC GATCGACGCG 
GACGCTGATG TTTCGGACCG ACAGTACTTT CGGGACGCCC TGCGCGGCGC GTCTGTTGTC 
ATTTCCGAAC CCGTGATGAC CCAGGTAACT GGCAGGCCAG GCGTCGCCAT GGCCATACCA 
GTGCGCTCGG TTGACGGACG CGTACGGGCG GTTCTTGTCG GGAGGCTGGA CCTGCGGCGC 
GAAGACTTCC TCCTGGCACT GTCGCGCAGC CGTATCGGCA CAACTGGAAC CTATTGCCTT 
GTCTCGTCGG GGCGGTTCCC TCGCTACGTC GTGCACGTTG ACTCGGCAAA AGTGCTCCAG 
CCAGCCAGCT CCGAAGATGA GTCATGCGGA ACCGATACCG CACGCTCCAT ATGGGAATTC 
GCTTGGCCCA CGCGACCCAT CGTTGCTCGA CACCGGCTTG AAACAGCAGG ATGGGAACTG 
GTTGCCGCAC TCCCGGCAAG AGAAGCCTAC TCACCAATCA CCCGTGCCAG GCTCAGGATT 
CTCACTGCCG TAGGCGCAGC GTTGGCTATT TCTGGCTTGC TGATGTGGCG GGTAGCCAGA 
CGCCTGTTGG CTCCATTGGA GAGCCTGGAA CGTGCCGTGC AGGAAAGTGC GACGGACTTT 
TCGAGGTGTG CTTCGCTTCC GACCTCAAGA AAAGATGAAA TCGGCTCCTT AGCCAGGACA 
TTCTCGACAG TTATGGGCCA GCTTGCCGAA CGCACGAATT TTCTCCTGGC TGCAAGGACG 
TTGGCAGAGG AACGGGAGGC ACGTATTCAT GCGATAGCCA ATCACATACC GGACCTGGTT 
GCCTACCTTG ACCTGGACGA ACGCTACGTG TTCGTCAATC ACGCGTATGA ACAGCGATTC 
GGGATATCTG CCGATGAAAT CATCGGACTG ACCCCCCTGC ATCTGTGGGG CGCCGCCGTT 
TATGCAAAAG TGATAGGGCC TCCCCTCCGG CTCGCGCTGT CAGGCGAACT AGTTAAGTTT 
GAGGCTGAGC ATCTCCACGA GAACCATCCT GTTTGCTTTG ATGTCACTTA TCAACCCGCC 
TGGAGTGCGA CGGCCGACAA GGTGGTTGGC GCGCACGTCT TTGCCCGAGA TATCACCGCA 
GAGCGCCAGA AGATGCGCAG TCTTGAGCAG ACGACCATGT CAGATTATTT AACCGGCCTG 
CTCAATCGGA AAGGCTTTGA CCGACGCTTG GAATCAGCGA TGGTACAAAG CGAGGAAGGC 
TCGAAAATAA TGGCTTTGCT CCTTGTCGAC ATTGATAACT TCAAGCTTGT GAATGACACT 
TACGGCCACC CTGTCGGGGA TAAGCTTCTG AACGTCGTCG CGACTCGCCT GAAGTCTTGT 
GCTGGCGAAA CTTGCGCCGT TGCCCGGGTA GGCGGCGATG AGTTTGCTGT AATTTTGGAG 
GACGTCTTGA CGTCGGATGC GGTTCTGCGA GTCGCCCGGG CAATCCTATC GGCGACCTGC 
GAGACCTTCA TTCTCAATGG CTACCAGATT GCATGCAGTA CGAGCGTGGG CGCGGCGCTT 
AAGAACCCCT GCGACAACAA CACTCGAAAT GAGCTCCTTC TCAAAGCGGA CACCGCCCTT 
TACTCGGCAA AACATTCCGG CAAAGCGAGA TTCATTCTCT TCGGCGAGTC CCAGACGGTT 
GCTTTGGATT CCAACGACCG CCCAAGGCGT GATTGA 

 

Protein sequence

MVRWSLKSRV VASTVVVVLL LAVLLILVAR HYVFANLEDS LQAQQDAQVR LVAEQLDDKF 
EVRTVILRRL AEHLAPLLDR GPAELKRVAE EAAPAPELFD SVFLAWPDGK RAFDTRTIDA 
DADVSDRQYF RDALRGASVV ISEPVMTQVT GRPGVAMAIP VRSVDGRVRA VLVGRLDLRR 
EDFLLALSRS RIGTTGTYCL VSSGRFPRYV VHVDSAKVLQ PASSEDESCG TDTARSIWEF 
AWPTRPIVAR HRLETAGWEL VAALPAREAY SPITRARLRI LTAVGAALAI SGLLMWRVAR 
RLLAPLESLE RAVQESATDF SRCASLPTSR KDEIGSLART FSTVMGQLAE RTNFLLAART 
LAEEREARIH AIANHIPDLV AYLDLDERYV FVNHAYEQRF GISADEIIGL TPLHLWGAAV 
YAKVIGPPLR LALSGELVKF EAEHLHENHP VCFDVTYQPA WSATADKVVG AHVFARDITA 
ERQKMRSLEQ TTMSDYLTGL LNRKGFDRRL ESAMVQSEEG SKIMALLLVD IDNFKLVNDT 
YGHPVGDKLL NVVATRLKSC AGETCAVARV GGDEFAVILE DVLTSDAVLR VARAILSATC 
ETFILNGYQI ACSTSVGAAL KNPCDNNTRN ELLLKADTAL YSAKHSGKAR FILFGESQTV 
ALDSNDRPRR D