| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6013 |
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| Symbol | |
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| ID | 3607475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007336 |
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| Strand | + |
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| Start bp | 140247 |
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| End bp | 142121 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637688905 |
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| Product | sigma-70 region 1.2 |
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| Protein accession | YP_293202 |
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| Protein GI | 72383848 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATGG CGCGCCAGGA CGAGGAGCGT CAACGCCAGA TGCGCGCGCT GATCGCGCTT
GGCCGAGAGC GCGGCTATCT CACCCACGCG GACATCAACG ATCACCTGCC CGATAACTTT
ACGCAAACTG CAGCGATGGA AACCATCGTC AGCACGTTCA GCGACATGGG GGTGACCGTA
TACGAGCAGG CGCCGGACGC GGACACGCTC CTGTTAAGCG ACACCGCGCC TGCCGGGGCA
TCCGACGATC AGGCGGACGA GGAAGCGGAA GCTGCACTGT CGACCGTCGA TTCCGAATTC
GGCCGCACGA CTGATCCGGT CCGGCTGTAC ATGCGCGAGA TGGGCGCGAG TGAACTGTTG
ACTCGCGCTG GCGAAATCGA GATTGCAAAA CGCATCGAAG GCGGCCTGCA GGGCATGATT
CAGGCGATCG CCGCGTGTCC GTCAGTCGTG TCCACGATGC TTGCCGATGT GGACCGCATC
GTTGCCGGCG AACTGCGTAT CGACGAACTG GTCTATGGTA TCAGCGACGA CGTGAACGAC
AGCGAAATAG CGCTAGCGTC CGATGACGTT CACGTGGAGG CAGACGCCTC CGACGACGAC
CCGGTCGGTG ATGACGTTGA ACCGGACGCC GGGGATTCGG AGAAGGCGAA CGCAGCGCGC
CTCGAACAAC TCACGCTCGA CAGTCTTGCG ATATTCGCGC GCGTGCGGGC ACTGTTCGAG
CAGTTGCCGG ACGCACCTGT TACCGGGAAA GCCCGTTCAG CAGCCGTTGA GCAACTGCGC
TCAAAGATCC AGTCCGAACT GGCGCCGATC CGCTTTACGG CCAAGACGAT CGACCGCCTG
TGCGCCAGTG TGCACGAACA GCTTACCGAG GTTCGTGCGA TTGAGCGCAG CATCCTCGAG
ATCGCTGTCG ACCGTTGCGG CATGCCACGC AAGGTGTTTG TAGAGTCATT CCCGGGCAAC
GAGACCGACC TTAAATGGAC CAGCAAAATG GCGGCGACCT CGCGGCAGTT TGGCGCGGCG
CTCAAGCGGC ATCTGCCGGC CATTCAGGCG GGCCAGCAGA AACTCATCGA TATTGAGGCC
AAGGTCACGC TGCCGCTCCA GCAATTCAAG CAGATCAACC GCCAGATGAG TGCCGCGGAA
TTAAAAATGC GGCAGGCCAA GCGAGAACTG ATTGAAGCGA ATCTTCGTCT TGTCATTTCA
ATTGCCAAGA AATACGTGAA CCGTGGCATG CATTTCCTGG ATCTTATCCA GGAAGGCAAT
ATTGGTCTGA TGAAGGCGGT GGACAAGTTC GAATACCGGC GCGGCTGGAA GTTTTCGACG
TACGCCACGT GGTGGGTCCG GCAGGCTGTC ACGCGTGCAC TTGCCGATCA GGCACGAACC
ATTCGTGTGC CGGTTCATAT GGTCGAGATG ATCAACAAGC TGAACCGGAT TTCGCGCGAT
TTTCGGCAAC AGACGGGACG GGAGGCGCAT CCCGCCGTTC TCGCCGAGCG CATGGAGATG
TCCGAGGAAA AAGTGCGCAG TATCCTCAGG AGCGCGAGGC AACCTGTCTC GCTCGAGACC
CCGGTGGGCG ACGACGCCGA CGCGACACTC GGCGACATGA TTGAGGATGT CTCTGCAAGT
TCACCGGCTG AGGCTGCGAT TCACGCGGAC ATGCGCGCCG CGATCGATGA GGCACTCGAC
GGTTTATCGC CGCGCGAGGC CAAGGTCCTG CGGATGCGAT TCGGGCTCGA TACGACCTCT
GACCGCACGC TTGAAGAGGT TAGCAAGCAG TTCGATGTGA CCCGCGAGCG GATCCGTCAG
ATTGAGAGCC AGGCGATGCG AAAACTGCTA CATCCCAGTC GCGCTGACAA GTTGAGGCCT
TTTCTCGAGC GTTGA
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| Protein sequence | MAMARQDEER QRQMRALIAL GRERGYLTHA DINDHLPDNF TQTAAMETIV STFSDMGVTV
YEQAPDADTL LLSDTAPAGA SDDQADEEAE AALSTVDSEF GRTTDPVRLY MREMGASELL
TRAGEIEIAK RIEGGLQGMI QAIAACPSVV STMLADVDRI VAGELRIDEL VYGISDDVND
SEIALASDDV HVEADASDDD PVGDDVEPDA GDSEKANAAR LEQLTLDSLA IFARVRALFE
QLPDAPVTGK ARSAAVEQLR SKIQSELAPI RFTAKTIDRL CASVHEQLTE VRAIERSILE
IAVDRCGMPR KVFVESFPGN ETDLKWTSKM AATSRQFGAA LKRHLPAIQA GQQKLIDIEA
KVTLPLQQFK QINRQMSAAE LKMRQAKREL IEANLRLVIS IAKKYVNRGM HFLDLIQEGN
IGLMKAVDKF EYRRGWKFST YATWWVRQAV TRALADQART IRVPVHMVEM INKLNRISRD
FRQQTGREAH PAVLAERMEM SEEKVRSILR SARQPVSLET PVGDDADATL GDMIEDVSAS
SPAEAAIHAD MRAAIDEALD GLSPREAKVL RMRFGLDTTS DRTLEEVSKQ FDVTRERIRQ
IESQAMRKLL HPSRADKLRP FLER
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