| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5972 |
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| Symbol | |
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| ID | 3607510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007336 |
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| Strand | - |
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| Start bp | 96680 |
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| End bp | 97981 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637688869 |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_293167 |
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| Protein GI | 72383813 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.802564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC GCAACGCGGC GGCCTTTGCC GCCCCGCGCC ACTTTACGCA CTGGATCCTG
TGGTCAACGC TCGCCTTCAT ACTGATCGGG CTTATGTGGG CTGCGCTGGC GCGGGTGGAC
GAAGTCACGG TTGGCGAGGG CAAGATCATT CCCTCCAGCC AGGTGCAGGT CGTGCAGAAC
CTCGAGGGCG GAATCGTTGC GAAGATCATG GTGCGGCCAG GACAGGTCGT GGCCAGGGAT
CAGCCGCTGA TGCGCATTGA CGATACACGC TTCACGGCCT CCTACCAGGA AGGCCGAACG
AAGGACGATG CACTGGTTGC CCGCATCGCG CGCCTGAGCG CTGAGGCAGG AGGCATGCCG
TTTGACGATG GCGCCGCGAC AAATGCCGGC ACCCGTGGCT TTGTGTCGGA AGAGCGATCG
TTGTTCGAAT CGCGCAAACG CGCACTGGAA GCCAATCTCG CGGTGGTTCG CCAGCAGGCG
GAGCAGCGCC GCCAGGAGCT GGCGGAAAAG CGCTCGCGCG AGCAGCAGTT GCGGCAGAGC
CATCAGCTGG TGTCGAAGGA ATTGACGATG ATGCGGCCCA TGGTGGCGCA AGGCGTGGTC
TCCGAGGTGG ATTTGCTGCG ACTGGAGCGG CAGGCGAACG ACCTGCAGGG CGAACTGGAG
GCCACGCGGC TGGCGATGCC GCGGCTGGAT GCAGCGTACC GCGAAAGCCT GAAGAAGATC
GAGGAACTGA CCACGCATTT CCGTGCGGAG GCGATGCAGG ACCTCAACCA GGCGAAGGCA
GAGCAGCAGG CGCAGAGTGC CACCAACACC GCATTGCAGG ATCGTGTGGA TCGTACGCTG
GTCAAGGCTC CCGTGGCCGG GATCGTCAAG CAGCTGAAGA TCAATACCGT GGGTGGCGTG
ATCCAGCCGG GCATGGATCT GGTGGAGATC GTACCGCTGG AGGACACGCT GCTCGTGGAG
GCGCGCGTGC GCCCTGCGGA CATTGCGTTC CTGCGGCCCG GGCAGCCTGC CATGGTCAAG
CTCTCCGCCT ACGACTTCTC TATCTATGGC GGATTTCCGG GTACGGTGGA GCACATCAGC
GCCGACACGA TGATGCCGGA ACGCCCCGGC GAACGGCCGG AGAGCTACTA CCTTGTGCGC
GTGCGCACGC GGGACAACCG CCCCACGGGC AGCACCGCGC AGGTGCCGAT CCTGCCCGGC
ATGGTGGCGA CCGTGGATGT GCTCACGGGC CAGAAGACCG TGCTGCACTA CATGCTCAAG
CCGATCATCA AGACCAAGGA AATGGCGTTG CGGGAACGCT GA
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| Protein sequence | MSERNAAAFA APRHFTHWIL WSTLAFILIG LMWAALARVD EVTVGEGKII PSSQVQVVQN
LEGGIVAKIM VRPGQVVARD QPLMRIDDTR FTASYQEGRT KDDALVARIA RLSAEAGGMP
FDDGAATNAG TRGFVSEERS LFESRKRALE ANLAVVRQQA EQRRQELAEK RSREQQLRQS
HQLVSKELTM MRPMVAQGVV SEVDLLRLER QANDLQGELE ATRLAMPRLD AAYRESLKKI
EELTTHFRAE AMQDLNQAKA EQQAQSATNT ALQDRVDRTL VKAPVAGIVK QLKINTVGGV
IQPGMDLVEI VPLEDTLLVE ARVRPADIAF LRPGQPAMVK LSAYDFSIYG GFPGTVEHIS
ADTMMPERPG ERPESYYLVR VRTRDNRPTG STAQVPILPG MVATVDVLTG QKTVLHYMLK
PIIKTKEMAL RER
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