| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5970 |
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| Symbol | |
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| ID | 3607547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007336 |
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| Strand | - |
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| Start bp | 89500 |
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| End bp | 90828 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637688867 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_293165 |
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| Protein GI | 72383811 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACCA CACTGTGCCG GCTGGCACGC GTGCTGCTAT GGGCCGCCAT GCTGGTGCCG
CTCGCCGCCG CCGCGCAGTC ATTGCGGCAG GCCGTGGACC AGACTGTACA TACCAATCCC
GAGGTGCTGG CTGCGGGCAG CCGGCGGCTC GCAGCCGATG AAGGACTGAA ACAGGCGCGG
GCCGGGTACC TGCCCCGCGT CGATGTCAGC GCGGCCACAG GTCGGGTGCG CCTGGACAGC
CACAACACGC GCTTAATGGG ACTGGCGGAT TCCAACTATG CCAGTCATGC AGCCGACGTC
ACGATTTCGC AGATGTTGTT CGACGGTTTT GCGGTGAGCA GCGATGTGGA CCGCCAGGGC
GCGAGGATCG ACGGAGCCGC ATACCGTGTC GGCGCGACCG CGGAGGACAT CGCGCTGCGT
ACCGTCGCCG TCTATATGGA AGTACTGCGC CGGCAGGAAA CCGTGGCAAT CGCCGAGGCC
AACCTCAAGG CCCACGAGTA TATTCACGAG CAGATCCGGA AAGGCGCCGA GAACGGCGTG
CTGCGCCGCG CCGACCTGTA CCAGGCGGAA AGCCGCCTGG CACTTGCCCG CGCCAGTCTC
CGGGCCGAGC AAGGCAGCCT GCAGGACGCC ATTACGGCAT ATCAGCGCGT GGTCGGCGCA
CCGCCGCAGG AACTGTCCCG GCCGACCTCG CTGGCTGCCG CGCTCCCGGC CACCGAGCGC
GAGGCGCTGC AGATCGCCTA TGCCAGCCAT CCATCGCTGA GCGCCGCACA GGCCGATGTC
GCCGAGGCCG AAGCCGCGCG CTCGATCGCC AAGGCAGCGA TGTGGCCAAG GGTGGATCTC
GAAGTGAACA TGAGCCGCGA CCGCGACCGG GTGCTCGGCA ACACCGACGA GCGTAGCGTG
ATGCTGCGGT TGCGCTACAA CATCTTCCGC GGCAATGCCG ACAAGGCGCG CATCAATGAA
GCCGGGTACC AGATTCAGGA AGCGGAGCAA AATCGGGACA GCATCCGCCG CCAGATTCAG
GAAGGCGTGT TGCAAGCCTA TAACGCTCAC CTCACCTCGA AAGACCGCGT CGTCCTCCTT
GGGCAGTACG TGGAAGCGAG CGACGCCACG CGCGTGAGCT ATGGCAAGCA GTTCCGGATC
GGGCAACGCA GCCTGCTGGA CCTGCTCAAT GCGGAAAATG AGTACTTCAG CGCCCGCACT
GCATACATCA CGGCGCAGTA CACCGAAATC GCCAGCCAGT ACCGCATCCT CGCCGGCATG
GGGCTGCTGC TCGCGACATT GCAGGTCTCG CTGCCGGAGG AGGGACTGAT ACGGATCGGG
CAACGGTAG
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| Protein sequence | MGTTLCRLAR VLLWAAMLVP LAAAAQSLRQ AVDQTVHTNP EVLAAGSRRL AADEGLKQAR
AGYLPRVDVS AATGRVRLDS HNTRLMGLAD SNYASHAADV TISQMLFDGF AVSSDVDRQG
ARIDGAAYRV GATAEDIALR TVAVYMEVLR RQETVAIAEA NLKAHEYIHE QIRKGAENGV
LRRADLYQAE SRLALARASL RAEQGSLQDA ITAYQRVVGA PPQELSRPTS LAAALPATER
EALQIAYASH PSLSAAQADV AEAEAARSIA KAAMWPRVDL EVNMSRDRDR VLGNTDERSV
MLRLRYNIFR GNADKARINE AGYQIQEAEQ NRDSIRRQIQ EGVLQAYNAH LTSKDRVVLL
GQYVEASDAT RVSYGKQFRI GQRSLLDLLN AENEYFSART AYITAQYTEI ASQYRILAGM
GLLLATLQVS LPEEGLIRIG QR
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