| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5961 |
|---|
| Symbol | |
|---|
| ID | 3607538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | + |
|---|
| Start bp | 79220 |
|---|
| End bp | 80143 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637688860 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_293158 |
|---|
| Protein GI | 72383804 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACT TTGACTGGGA CAACCTTCGT GTATTTCTCG CCGCTGCGCG GTCACAGTCG
ACGCTGGAAG CATCCCATAC GCTGAAGATG AGTCAGTCGA CCATTTCCCG ACGCATCCAG
AGGCTCGAGA GAGATACAGG TTCGAAACTG TTTGAAAGAA GCTCGCAGGG CCTCAGCCTG
ACGAGCGCCG GTCATCGACT GTTGGAGCAC GTCGAGAAGT TGGAGAGCAC GCTCTCCGCT
GTCGAGACCG CAGTGTTTAG CGACACCTTG GCACTGACTG GAGAAATTAG ACTAGGTTCG
ACAGAAGCCT TTGGCACATT TTTTCTTGCG CCGCATTCCG CTCAGTTCTG TTCTAGACAC
CCAGCCATCA CTGTCGACGT TCTTCCGATG CCGCGCTCAC TGAATTTATC GAAGCGCGAA
GCTGATGCGT CAGTAGCGAT TGATAGGCCA AGCGCAAATA GCTTCGTGAC CTGCAAGCTT
TCGGACTACC GGTTGGTCCC CTATGCGACA GCGGAGTATT TAGACAAGCA TCCGCCCATC
CGTAAGTTGG ACGACCTCGC CGGTCATCGC TGGATCGACT ACGTCGACGA TCTGGTGTTC
TCCCCGCAAC AGTTCATGCT GCAAAAGTGG ATACCTTCAT GTCGTCCATT TCTCCGCAGC
ACCAGCGCGG TGGCACAAGC GCAGGCAGTT AAGGCAGGCC TGGGAATTGC GGTGTTACCG
TGCTTCTTAG GAAGTCTGAT CGATGGGCTC GTGCCAGTAA TGCTTGACGA AATTCATATT
ACAAGAACGT TCTGGTTGGT TGCACCTCCG GAGCGGCGCG AAGTCGCACG AGTCAAGGCA
CTGTGGGATT ACCTTCGCGA CGTAGCGGAA GTGAACAAGG ATTTCTTGAT GGGGCACACT
CGAACTATGA TTTGGGTTAA GTGA
|
|---|
| Protein sequence | MNHFDWDNLR VFLAAARSQS TLEASHTLKM SQSTISRRIQ RLERDTGSKL FERSSQGLSL
TSAGHRLLEH VEKLESTLSA VETAVFSDTL ALTGEIRLGS TEAFGTFFLA PHSAQFCSRH
PAITVDVLPM PRSLNLSKRE ADASVAIDRP SANSFVTCKL SDYRLVPYAT AEYLDKHPPI
RKLDDLAGHR WIDYVDDLVF SPQQFMLQKW IPSCRPFLRS TSAVAQAQAV KAGLGIAVLP
CFLGSLIDGL VPVMLDEIHI TRTFWLVAPP ERREVARVKA LWDYLRDVAE VNKDFLMGHT
RTMIWVK
|
|---|
| |