Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_C5956 |
Symbol | |
ID | 3607533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007336 |
Strand | - |
Start bp | 73333 |
End bp | 74103 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637688855 |
Product | ABC transporter related |
Protein accession | YP_293153 |
Protein GI | 72383799 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00448247 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGACG TCATCCTAGA GACTCGCGGG CTTACAAAGC AGTTCAAGGG ATTCACTGCC GTAGCCGGCG TCAACATGAA GATTCAACGC GGCCATATTC ACGCACTGAT CGGCCCAAAC GGCGCAGGAA AGACAACCTG CTTCAATCTG CTTACCAAGT TCCTTGTGCC GACGAGTGGG TCCATCTTGT ACAACGGTCG TGACGTGACC GGTTCCCGAC CGGCCCAGCT TGCAAAGGAC GGGATTATCC GCTCCTTCCA GATATCCGCA GTATTTCCTC ATATGACGGT GTTGGAGAAC GTGCGGATAG GACTCCAGCG AGCATTGGGG ACGTCATTCC ACTTCTGGAG GAGTAGCCGC CTGCTGCAGC AGCTTGACGC TCGCGCCATG GAACTGCTTG ATGAGGTCGA CTTGCGCGAG TTCGCCGATA TGGTCACCGT AGATCTCCCC TATGGCCGCA AGCGTGCGCT GGAAATCGCA ACAACGCTTG CCATGGAGCC CGAGCTGATG CTGCTTGACG AGCCCACCCA GGGGATGGGA CACGAGGACG TGTCTCGAGT AGCGGATCTT ATCAAGCGGA TCTCCGCAGG CCGAACAATC CTGATGGTCG AGCACAACAT GGGCGTGGTT TCGCGAATCT GCGACCGGAT TTCCGTGCTG CAACGAGGGG CTCTTCTCGC GGAGGGAACC TACGAAGAGG TATCTTGCCT CCCCTCCGTT GTCGAGGCAT ACATGGGCAC CCCAACCGCA CCTCTCACAG GTGCACATTG A
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Protein sequence | MTDVILETRG LTKQFKGFTA VAGVNMKIQR GHIHALIGPN GAGKTTCFNL LTKFLVPTSG SILYNGRDVT GSRPAQLAKD GIIRSFQISA VFPHMTVLEN VRIGLQRALG TSFHFWRSSR LLQQLDARAM ELLDEVDLRE FADMVTVDLP YGRKRALEIA TTLAMEPELM LLDEPTQGMG HEDVSRVADL IKRISAGRTI LMVEHNMGVV SRICDRISVL QRGALLAEGT YEEVSCLPSV VEAYMGTPTA PLTGAH
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