| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5946 |
|---|
| Symbol | |
|---|
| ID | 3607562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | + |
|---|
| Start bp | 63166 |
|---|
| End bp | 64884 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637688846 |
|---|
| Product | tannase and feruloyl esterase |
|---|
| Protein accession | YP_293144 |
|---|
| Protein GI | 72383790 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATG CTCGCGATAA GGCCTGGCGT GGCGTCGGGG CCTTGACCGT CCTCTCAACA
TTAACGATCT CGCTGGCTGG ATGTGGGGGT GAGGAGGGCG CCCCATCAGC CGCTGCACCT
GGCCCAACGA CTGCGCAAAA GTCACCAACA GAACTGTGCG GGGAGTTGAA GGGCATTGCC
ATTCCATCTG GAAGTATTGG CTTGGCGTCT ATGGGGGCAA CGATAACCTC TGCAACGTTG
GTGGCCGCAA GCGACAGCGG CAACACGAGC GGTGAGTACT GCAAAGTACT GGGTGGCATT
CATCCCGTTG ACTCTGCTGC ACCGGACATC CAATTCGAAA TTGACCTGCC TACGGCATGG
AACGGGAAGT CGCTCCACTT TGGCGGTGGC GGGCTTGATG GAGTCATTCC TGACACGACA
GGCTTCGCCG CATCGGGATT CTCGCCGTAT GGGGAGCCGA TCGGTGTCCT TGCCCCGCTG
GCTCGAGGCT ATGTCACCTA CGGTAGCGAT GCTGGCCATC AGGCAGCCAA TGACTTCGTC
GGAACTTTCG CGTCAAACGA TGAGGCACTA GCAAACTATG CAGGAAACCA CATAAAAAAG
ACGCACGACG CCGCGACGTT TCTGATGAAG GCGCGATATG GGCACTCCGC GAGCCAAAGC
TACTTCATTG GGGGATCTGG AGGAGGTCGG ATGGGGCTCG TTGCGGCCCA AAAGTATGCG
TCTGATTACG ATGGCGTCAT CGCCACCTAT CCTGCGTCCG GGCTGCTTGG TCTCTCGTTC
CAGATGGGGC GAATTTCGCA AGCCTCCCTC TCACCTGGCG GGTTTATCAA TGCCGCTAAG
GGCAAGGTAT TGCGAGACGC GGTCATGTCG CAGTGCGATA TCCTTGATGG GATAGGGGAC
GGCATCATCA GCAATCCAGG CGCGTGCGGA TTTGACGCGG CTACACTGCG CTGTCCAGGC
GGTGCAGACA CTGGAGACAC GTGTCTGTCG GATGCACAAC TCAATACCGT GGCTACAATT
GCCACGCCGC TCACCACTAC CTTCGATTTC GCGAATGGTA TTCGAACCAT CCCGGGCTAC
AAAGTACTTG CCGGCACCGA CTTCTGGGGG CCGCTGTATC CGTCCCTGGG TTCATCAGCA
GCGGACGCCG TTGCGGATCC GGCCACGGCT GATGTGGCAA AGGCATCGTT CTTCTATGCC
TTCCCGAACG CCCTGGTGAA GTATGCAATT GCTCGCGACG CGAGCCTGGA CATCCTTACC
TTCGGGTTCA CAAATCCCGG CGCCCTGAGC GCTCGGACGC AAGCAGTGAG TCAGTTGATA
GACGGAACAA GCGTCAATTT CGATGCCTTC AAAAACAAGG GCGGAAAGTT GATCCTGCAA
CATGGCCAGG CGGACCAGTT CATTCCTGCG CAAATGTCCG TCGACTTGTA CAACCGCCTG
CTTGCAGCCT ATGGGCAGTC CCAGCTCTCA TCGTTTCTGA AGTTCTATTT GTTCCCGGGC
GCAGCGCATG GCTTCGGCGG CCAATTTGAA GGAGGTTACG ACAGCCTGAC GGCCTTGGAC
AATTGGGTGA CAAAAGGGGT GGAACCCCAT GATCTGATCG TTACCGATGT TACTCCGCCA
AATGCTGGTA GAAGGCGCCC GGTATGCGAG TATCCTTCGT GGCCAAAGTA TGTCGGCGGC
GACCCGAACA GTGCAGCAAG TTACGTCTGT ACTGCTTGA
|
|---|
| Protein sequence | MNHARDKAWR GVGALTVLST LTISLAGCGG EEGAPSAAAP GPTTAQKSPT ELCGELKGIA
IPSGSIGLAS MGATITSATL VAASDSGNTS GEYCKVLGGI HPVDSAAPDI QFEIDLPTAW
NGKSLHFGGG GLDGVIPDTT GFAASGFSPY GEPIGVLAPL ARGYVTYGSD AGHQAANDFV
GTFASNDEAL ANYAGNHIKK THDAATFLMK ARYGHSASQS YFIGGSGGGR MGLVAAQKYA
SDYDGVIATY PASGLLGLSF QMGRISQASL SPGGFINAAK GKVLRDAVMS QCDILDGIGD
GIISNPGACG FDAATLRCPG GADTGDTCLS DAQLNTVATI ATPLTTTFDF ANGIRTIPGY
KVLAGTDFWG PLYPSLGSSA ADAVADPATA DVAKASFFYA FPNALVKYAI ARDASLDILT
FGFTNPGALS ARTQAVSQLI DGTSVNFDAF KNKGGKLILQ HGQADQFIPA QMSVDLYNRL
LAAYGQSQLS SFLKFYLFPG AAHGFGGQFE GGYDSLTALD NWVTKGVEPH DLIVTDVTPP
NAGRRRPVCE YPSWPKYVGG DPNSAASYVC TA
|
|---|
| |