| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5928 |
|---|
| Symbol | |
|---|
| ID | 3607583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | - |
|---|
| Start bp | 43507 |
|---|
| End bp | 44313 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637688828 |
|---|
| Product | hydratase/decarboxylase |
|---|
| Protein accession | YP_293126 |
|---|
| Protein GI | 72383772 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR02312] 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCTG ATCAACTCAA CGAAGCCGCG CACCGGCTGG AACAGGCGGA GCTGACACGC
CAGCCTTGTC GACAGTTCTC GCTCGACTAT CCCGATATGC AGATCGAGGA TGCCTATGCC
ATCCAGAGTG CATGGATGGC ACTCAAGCAG AAAAAGGGCC GAACAATCAA GGGGCGCAAG
ATCGGCCTGA CTTCAAAGGC CATGCAGCGG GCCGTGAACA TCAGCGAACC TGACTTTGGC
GTGCTGCTCG ACGACATGTT CTACCGGGAC GGGTCTGCGA TTCCCTCGGA GCGGTTCATG
CAACTGCGGA TCGAGGCGGA ACTGGCATTC GTCCTGGATA AGCCGCTTTC GGGTCCGGAC
TGCACACTGT TCGACGTGCT TGACGCGACT GCCTACATCA CGCCGGCGCT TGAGATCCTG
GACGCGCGAA TCCAACGTGT GGATCCGGAA ACGAAGCGCA CCCGCACTGT ACTGGATACG
ATTTCCGACA ACGCAGCCAA TGCCGCCATC GTGCTGGGCG GCCGCCCCTT CCGGCCGAGC
CTGCAAGATG TCGACCTCCG CAGAATCGGC GCCATCGTCA GCAAGAATGG CGAGGTCGAG
GAGACCGGAC TTGCCGCCGG GGTGCTCAAC CATCCGGCAT ACGGCGTAGC GTGGCTCGCC
AATCGCCTCC ATCGGTACGG CGGATCGCTG CAGTCGGGTC AGGTTGTCCT CGCTGGGTCT
TTTATCCGGC CACTGGAGGT CTGCAGGGGC GACACGATAA TTGCCGACTA TGGCGACTTC
GGCACGGTGT CGTGCCACTT CAACTGA
|
|---|
| Protein sequence | MTPDQLNEAA HRLEQAELTR QPCRQFSLDY PDMQIEDAYA IQSAWMALKQ KKGRTIKGRK
IGLTSKAMQR AVNISEPDFG VLLDDMFYRD GSAIPSERFM QLRIEAELAF VLDKPLSGPD
CTLFDVLDAT AYITPALEIL DARIQRVDPE TKRTRTVLDT ISDNAANAAI VLGGRPFRPS
LQDVDLRRIG AIVSKNGEVE ETGLAAGVLN HPAYGVAWLA NRLHRYGGSL QSGQVVLAGS
FIRPLEVCRG DTIIADYGDF GTVSCHFN
|
|---|
| |