| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5927 |
|---|
| Symbol | |
|---|
| ID | 3607582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | - |
|---|
| Start bp | 42696 |
|---|
| End bp | 43490 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637688827 |
|---|
| Product | 2-dehydro-3-deoxyglucarate aldolase |
|---|
| Protein accession | YP_293125 |
|---|
| Protein GI | 72383771 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTG CCGTCAATCA ATTCAAGAAG GCACTGCAGG CTGGTCGGCC GCAGATCGGC
ATCTGGTCGG CGCTGGCAAG CCACTACACC GTGGAAATCC TTGCCGGCGC GGGGTTCGAC
TGGATCATGC TCGATACCGA GCATGCGCCC AACGAAGTAT CGATGGTGCT GCAGCAGCTT
CAGGCTGTCG CCGCCGATCC GCACCGCAAC ACCTCGGCAG TGGTAAGGCC AGCGTGGAAC
GATCATGTCC TGATCAAGCG CTTCCTCGAT ATCGGCGCCG AGACGCTGCT GATTCCGTAC
GTGCAGTCGA GAGAGGAGGC CGCCGCCGCG GTCCGGTCAG TGCGGTATCC CCCGCTTGGC
ATTCGCGGCG TTGGCGGTGC AACCGTACGC GCCACGCGCT TTGGTCGTAC ACATGACTAT
ATGCAGCAGT GCGGCCAGGA AATCTGCCTG CTGGTTCAGG TTGAGACGGC GGAAGCACTG
GAAAACCTGG AGTCAATCGC CAGCGTCGAC GGCGTGGATG GCATTTTCAT CGGTCCTGCG
GACCTTGCTG CCAGCATGGG TTATCCGGGC CAGCCAACAC ATCCGGTCGT TCGGGGGGAG
ATCGACAAAG CCATCAGGCG TATCGCCGCG TTTGGAAAGG CACCTGGAAT ACTCATGGTA
GATGAAGCCC GCGCAAAGGA ATGCCTGGCG CTCGGCGCGC TGTTTGTCGC CGTGGCTGTC
GACATGGTGA TGCTCGCTCG CGGCGCGGAA GCCGTTTCCG CACGATACAA AGGCAGCGAC
GTGATCGGCG CCTAA
|
|---|
| Protein sequence | MAIAVNQFKK ALQAGRPQIG IWSALASHYT VEILAGAGFD WIMLDTEHAP NEVSMVLQQL
QAVAADPHRN TSAVVRPAWN DHVLIKRFLD IGAETLLIPY VQSREEAAAA VRSVRYPPLG
IRGVGGATVR ATRFGRTHDY MQQCGQEICL LVQVETAEAL ENLESIASVD GVDGIFIGPA
DLAASMGYPG QPTHPVVRGE IDKAIRRIAA FGKAPGILMV DEARAKECLA LGALFVAVAV
DMVMLARGAE AVSARYKGSD VIGA
|
|---|
| |