| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5890 |
|---|
| Symbol | |
|---|
| ID | 3607750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | - |
|---|
| Start bp | 4061 |
|---|
| End bp | 7099 |
|---|
| Gene Length | 3039 bp |
|---|
| Protein Length | 1012 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637688792 |
|---|
| Product | xanthine dehydrogenase, molybdenum binding subunit apoprotein |
|---|
| Protein accession | YP_293090 |
|---|
| Protein GI | 72383736 |
|---|
| COG category | [C] Energy production and conversion
[S] Function unknown |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
[COG3427] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.614012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAT TCGATGCCGG CGAAACGACC GGCACGGTAC AGGAGACACA GGAGACCCGG
CAGGCACCCC ACGTCGGTCG CCCAATGGCG CGCGTCGAGG ACGCCGCCAT CCTGACCGGC
CGCGGCCGCT ATGCCGACGA CCTCGGCGTC AGGCCCGGTA CGCTGCACGC CGCCATCCTG
CGCTCGCCGC ACGCGCACGC CGAGCTCGGC GCCATCGACT TCGCGGCGGC ACTGAAGGTA
CCGGGCGTGC GCGCGGTGTT GACGGCCGCT GACCTGCCCG CCTGGTCCCG GCCCTTCGTG
GTCGGCGTGA AGGCGCCGAT GGAGCAGTGG GCGCTGGCGA TGGATCGCGT GCGCTACGTA
GGCGAACCGG TGGCCGTAGT CGTGGCCGAA AGCCGCGCGC TGGCCGAGGA TGCGCTCGAC
CTCGTGCGCG TGGATTACCG CGCGCTGCCA CCGGTGGTGT CGATCGAGGC TGCCGTGGCA
GGCGACGCCC CCGTGCTGCA CTCCGGCCTC GGCAGCAACG TCGCCAGCGA CCGCCATTTC
TGCTACGGCG ACCCCGAGGC CGCATTCGCC GCCGCGCCGC ACCGCGTGAC ACTGACCGCG
CACTACCCGC GCAACACCTG CACACCTATC GAGTGTGGCG TGGTAATTGC CGAACACTTG
CCGGGCGACG AGGGCTACCA GGTCACCTCC AACTTCATGG GGCCGTTCTC GCTGCACGCC
GTCATGGCGA TGGCCCTGCA GGTGCCCGCT AACCGCCTGC GCCACGTCGC TCCGCGCGAC
TCGGGCGGCA GCTTCGGCGT CAAGCAGGCG GTGTTTCCCT ACGTAGTGCT GATGTGCCTC
GCTTCGCGCA AGGCCGGCGC GCCGGTGAAG TGGGTGGAGG ACCGGCTCGA GCATCTGAGC
GCCGCCACCT CGGCCACCGC GCGGCTCTCC ACCCTGGAAG CTGCCGTCGA GGCCGATGGC
CGCATCGTTG CCCTATCGTA CGATCAGCTC GAGGACTGCG GCGGCTACCT GCGCGCGCCG
GAGCCCGCTA CCTTCTACCG CATGCATGGC CTGTTGACCG GCGCCTACGC GATCCCCAAC
CTGCTGGTGC GCAACCGCGT GGTGTTGACC AACAAGACAC CGACTGGCCT TGTGCGCGGC
TTCGGCGGGC CGCAAGTGTA CTTCGCGCTG GAGCGGCTGG TACAGCGGAT CGCTGTGGAA
CTCGGCCTCG ATCCGCTCGA CGTCTACCGC CGTAACTTCG TGCCCGCCGA CGCCTTTCCG
TTTCGCGCGG CGGCCGGCGC GTTGCTCGAT TCCGGCAACT ACCAATTGGC GATGTCTCGC
GCCCTGGAAG CGGGGGCTTA CGATGAACTG AAGCGCCGTC GCGATGCCGC GCGCGCCGAG
GGCCGGCTGT ACGGCATTGG CTTTGCTGCC ATCGTCGAGC CGTCGGTGTC GAACATGGGC
TACATCACCA CCGCCACACC GGCCGAGGCA CGCCGCAAGG CTGGGCCAAA GAACGGCGCT
ATCGCCAGCG CTACAGTCAG CGTCGACCTG CTCGGGGGCG TGGTAGTGAC CGTCGCCTCC
ACGCCAGCAG GACAGGGCCA CATGACCGTA TGTGCACAGG TCGTGGCTGA TGTACTCGGC
ATCGATCCCG CGGACGTGGC GGTCAACGTC GAATTTGATA CCCACAAGGA CGCGTGGTCC
GTCGCTGCGG GCAACTACTC CAGTCGGTTT GCCGGCGCCG TGGCCGGAAC CGTGCACCTG
GCCGCTACGC GTGTGCGCGA CAAGCTGGCG CGCATCGTGG CTTCCCACCT CCGTTGCGAC
CCGGCCGAAC TGGTCTTCAC CAACGGCTGC ATTGCCCGCA AGAGCGCTTC GCCAGACACC
GCACTACCCT TCGCCCGCGC CGCCAGCAAC GCGCCGCACT GGTCGCCGCA ACTCCTGCCA
GCCGGTGAGG AACCCGGCCT GCGTGAGACC GTGTTCTGGT CACCGCCCAA CCTCGACGCG
CCGGACGAAC AGGATCGCGT CAACACGTCC GCTTGTTACG GCTTCGCCTT TGACCTGTGC
GGCGTGGAGA TCGACCGTGC CACCGGCCGC GTGCGCATCG ACCGCTACAT CACCGCGCAC
GATGCCGGCA AGCTGCTCAA TCCGGCACTG GCCGACGGCC AGATCCGCGG CGCCTTCGCG
CAGGGACTCG GCGCGGCGCT GATGGAGGAG TTCCGCTATG GCCCCGACGG CAGCTTCCAG
TCCGGCACGC TGGCCGACTA CCTGATGCCC ACCACATGCG AAGTGCCCGA CCCGATCATC
GTTCATCTGG AAACGCCGAG CCCGTTCACG CCGCTCGGGG CCAAGGGGCT CGGCGAGGGC
AACAACATGA GCACACCGCC CTGCGTCGCT AACGCCGTGG CGGACGCACT CGGCGTGCGC
GACATCCGCC TGCCACTTAC GCCCGCCAAG GTGATGGCGA TGATCGGCTT TGACGATCCG
CCACCGTCGC GGCCCGAACT GGCCGAAGCG GCGAACGAGG CAGCACCTGC AAACGGCAAA
GGCGGCAAGG CCGCGAAGGC CCTGAGCGCA CGCGGGGCCG TCGATCTCGA CGCCACACCG
GAAGCCGTCT TCGCCGTCCT GCTCGACCCG AAGGCGCTGG CCCAGGTCGT GCCCGGCTGC
CACGCGCTCG AACGCATCGG CGAGAACCGT TACCGCGCAG ACGTAACCGT GGGCGTGGGC
ATGATCAAGG CGCGCTACGA AGCCGAGATC GCGCTGTCCG ACCTGGAGCC GCCGCACCGG
CTACGGCTGG CAGGCGCCGG CCTGTCCTCG CTCGGCAGCG CACGCGGCTC CGGAATGGTA
GAGCTGACCC CGCACGGCGA CGGCACCCGT CTCGCGTACG ACTACGAAGC CGAGGTGTCC
GGCAAGGTGG CGGCCGTCGG CGGCCGCATG CTCGAAGGCG CGGCCAAAGT GGTGCTGCGC
CAGTTGTTCG AATCGCTCGG CCGGCAGGCA GGCGGCAAGC CGGTGCGCAG TCCCGGCTGG
ATCGCTCGCC TGCTGGCGCT CCTGGGAGTC CGTCGATGA
|
|---|
| Protein sequence | MKRFDAGETT GTVQETQETR QAPHVGRPMA RVEDAAILTG RGRYADDLGV RPGTLHAAIL
RSPHAHAELG AIDFAAALKV PGVRAVLTAA DLPAWSRPFV VGVKAPMEQW ALAMDRVRYV
GEPVAVVVAE SRALAEDALD LVRVDYRALP PVVSIEAAVA GDAPVLHSGL GSNVASDRHF
CYGDPEAAFA AAPHRVTLTA HYPRNTCTPI ECGVVIAEHL PGDEGYQVTS NFMGPFSLHA
VMAMALQVPA NRLRHVAPRD SGGSFGVKQA VFPYVVLMCL ASRKAGAPVK WVEDRLEHLS
AATSATARLS TLEAAVEADG RIVALSYDQL EDCGGYLRAP EPATFYRMHG LLTGAYAIPN
LLVRNRVVLT NKTPTGLVRG FGGPQVYFAL ERLVQRIAVE LGLDPLDVYR RNFVPADAFP
FRAAAGALLD SGNYQLAMSR ALEAGAYDEL KRRRDAARAE GRLYGIGFAA IVEPSVSNMG
YITTATPAEA RRKAGPKNGA IASATVSVDL LGGVVVTVAS TPAGQGHMTV CAQVVADVLG
IDPADVAVNV EFDTHKDAWS VAAGNYSSRF AGAVAGTVHL AATRVRDKLA RIVASHLRCD
PAELVFTNGC IARKSASPDT ALPFARAASN APHWSPQLLP AGEEPGLRET VFWSPPNLDA
PDEQDRVNTS ACYGFAFDLC GVEIDRATGR VRIDRYITAH DAGKLLNPAL ADGQIRGAFA
QGLGAALMEE FRYGPDGSFQ SGTLADYLMP TTCEVPDPII VHLETPSPFT PLGAKGLGEG
NNMSTPPCVA NAVADALGVR DIRLPLTPAK VMAMIGFDDP PPSRPELAEA ANEAAPANGK
GGKAAKALSA RGAVDLDATP EAVFAVLLDP KALAQVVPGC HALERIGENR YRADVTVGVG
MIKARYEAEI ALSDLEPPHR LRLAGAGLSS LGSARGSGMV ELTPHGDGTR LAYDYEAEVS
GKVAAVGGRM LEGAAKVVLR QLFESLGRQA GGKPVRSPGW IARLLALLGV RR
|
|---|
| |