Gene PMN2A_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1883 
Symbol 
ID3607295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp542830 
End bp543105 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content41% 
IMG OID637688776 
Productputative carboxysome peptide A 
Protein accessionYP_293074 
Protein GI72383719 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4576] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID[TIGR02703] carboxysome peptide A 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.909228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATTT GTAAAGTTCT CAAACCACTT GTCTCAACCA ATCGTATTCC AGGCTTTGAA 
CATAAGCATT TACAGGTTGT ATTGGACGGC AGCTCAAAAA AAGTTGCTGT TGATGCTGTT
GGATGTAAAC CAGATGATTG GGTTATATGT GTAGGAAGTT CTGCCGCTCG CGAAGCTGCT
GGAAGCAAGT CTTATCCAAG TGATTTAACT ATTGTTGGAA TTATTGACCA TTGGGATCCA
GAGACACAGC AACAGATATC AGGAGGAGCA AAGTAA
 
Protein sequence
MLICKVLKPL VSTNRIPGFE HKHLQVVLDG SSKKVAVDAV GCKPDDWVIC VGSSAAREAA 
GSKSYPSDLT IVGIIDHWDP ETQQQISGGA K