Gene PMN2A_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1873 
Symbol 
ID3607285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp531497 
End bp532753 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content40% 
IMG OID637688766 
Productlight-independent protochlorophyllide reductase subunit N 
Protein accessionYP_293064 
Protein GI72383709 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01279] light-independent protochlorophyllide reductase, N subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGTG CAACGCTCCT TAAGGAATCT GGTCCAAGAG AGGTTTTTTG CGGCCTAACA 
TCTATTGTTT GGCTCCATAG GAGAATGCCT GATGCTTTCT TTCTGGTTGT GGGTTCTAGA
ACCTGTGCCC ATCTGATTCA AAGTGCAGCT GGTGTGATGA TTTTTGCTGA GCCGCGTTTT
GGCACAGCCA TTTTGGAAGA AAGAGATTTG GCAGGATTAG CTGATGCTCA TGACGAGTTA
AACAGAGTAG TTAAAAATCT TTTAGCAAGA CGTCCGGAAA TAAAAACTCT TTTTCTAGTT
GGTTCATGCC CAAGCGAAGT AATAAAAATA GATCTTTCAA GAGTTGCCGA AAATCTGAAT
ATTGAACTTA AAGGTCAAGT AACAGTATTG AATTATTCGG GTAGTGGAAT TGAAACAACT
TTCACTCAAG GCGAAGATGG AGCTTTAAAA GCATTGATCC CATTGATGCC GAAGAGTGAT
CAAAAGAAAT TGCTTTTAGT AGGTACTCTT GCAAATGCTG TAGAGGATCG GCTTACTAGT
ATTTTTAATC GACTTGGCAT AGACAAAGTA GAAAGTTTTC CACCCAGGCA GTCAACTGAA
TTACCTTCAA TTGGCCCGGA GACTAAAGTC CTACTTACTC AGCCATATTT AACTGATACG
GCAAGAGAGT TGAAAAATAA AGGTGCTGAA ATAATTGAAG CTCCCTTTCC CTTAGGTGTC
ACGGGAAGTA CCTTATGGAT TCAGGCTGCT GCGGATTCAT TTGGAATAGA GAAATCTCTA
GTTGATTCAA TATTAAATCC ATTGATATCT AGGGCAAAGC AAGCCTTGAT CCCCCATGTA
GAGAAACTTT CTGGAAAGAA ACTGTTTCTT TTGCCCGAAT CTCAGTTAGA AATACCTCTC
GCCAGATTTC TAAGTAACGA GTGTGGAATG GAGATTATTG AAATAGGAAC GCCTTACTTA
AATAGAGATT TAATGAAAGC AGAAATAGAC TTGCTACCAC CCGATTGTCG TATCGTTGAG
GGACAGCATG TTGAGAGGCA ATTAGACAGA GTAAGAGATA GTTCGCCAGA TCTAGTTGTT
TGTGGAATGG GGCTTGCTAA TCCACTCGAA GCAGAAGGGA TATCAACTAA ATGGTCGATT
GAAATGGTTT TCAGCCCAAT TCACGGGATT GATCAAGCTT CTGATCTCGC AGAATTGTTC
TCAAGGCCAC TTCGCAGGCA TGACATTTTA AATCCTAAAA CACTTACATC AAATTAA
 
Protein sequence
MSGATLLKES GPREVFCGLT SIVWLHRRMP DAFFLVVGSR TCAHLIQSAA GVMIFAEPRF 
GTAILEERDL AGLADAHDEL NRVVKNLLAR RPEIKTLFLV GSCPSEVIKI DLSRVAENLN
IELKGQVTVL NYSGSGIETT FTQGEDGALK ALIPLMPKSD QKKLLLVGTL ANAVEDRLTS
IFNRLGIDKV ESFPPRQSTE LPSIGPETKV LLTQPYLTDT ARELKNKGAE IIEAPFPLGV
TGSTLWIQAA ADSFGIEKSL VDSILNPLIS RAKQALIPHV EKLSGKKLFL LPESQLEIPL
ARFLSNECGM EIIEIGTPYL NRDLMKAEID LLPPDCRIVE GQHVERQLDR VRDSSPDLVV
CGMGLANPLE AEGISTKWSI EMVFSPIHGI DQASDLAELF SRPLRRHDIL NPKTLTSN