Gene PMN2A_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1868 
Symbol 
ID3607280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp526642 
End bp527832 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content31% 
IMG OID637688761 
Producthypothetical protein 
Protein accessionYP_293059 
Protein GI72383704 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.180278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGATCC ATCCAAGTTG GTTTTTGGTT TTCTTGTATT TTACTTTGTC AGCTAAAGAT 
CAGTTCGAGA CGCTTTTGAA TGGTCAAGCA TCTATTTGGA ATGGATGGGT GATTGGTGCA
TCTACCTCTT CTCTTTTGTT TTTATCTGTT TTATTGCATG AATTGGCTCA TTCTTTTGTA
GCAATTGGAG AGGGTCTAAA AGTTAGAGAC ATAACACTTT TTTTTCTTGG AGGTATGGCA
AGTCTTGAAA AGGAATGTCC GACTTCAAAA GGAAGTTTGA AAATCGCTAT TTCAGGTCCT
GTTGTTAGTC TTTTATTAGC TTTTTTAATG ATTTTATTAA GTAATAATTT ATCAGTATCA
AATTTTATTC TCTCTAATTT ATTTAAGCAG GTTGGTAGCC TCAACCTTTT AATAGGTGTA
TTTAATTTAC TTCCGATAAT GCCTCTAGAT GGTGGCGTAA TATTAAAATC TTTAATTTGG
TACTTTACGG GGAGTAAAAG AGCAGGGATT AAAGTGGCTA TTGGCTCTGC AAGATTAATT
TCTTTTCTTG CTATTTTTAT TGGTATTTTA AGTTTGCTTA GGGGCAACTT CTATCTTTCC
ATTTGCTTTT CTATTATTGG TTTATTTGTT TTTTCTTCAT CTAAATCACA GAGCCAAATT
ATTCAAATAC AAAAGATATT ATCTGAATTA TATGTTAATC AGGTTTGTAG TCGTTCATTT
AGGGTCCTAG AGGATGATTT GCCTGTGAAA GTTTTATCTA AATATAGTTC ATTTAATAAA
GATAATTTTT CCAATGAAGT ATGGATCCTT TTGTGTAGAG AAGGGAGATG GGTCGGTTAT
GTAAATGAAA AAATCTTGAA GAATATTTCT GTACAAAACT GGGATAAAAA ATTTCTTTAT
GAATTCTCAC AACCAATAAA TGAATTGCCA TCTATTAGTG AAAAAGAATC ATTATGGAAA
GCAATATTAA AAATAGAAAA AACAAAAGAT GGAAGACTAC TTGTACTATC ATTTTCTGGT
CTTCCTCTTG GAACTTTAGA TAGAGTAGAT TTAGGTAAAG CAGTACTTAA AAAAATCGGA
TTAAATCTTC CAGACCAATT AATTAAAATT GCAAGAAAAG AAAATATTTA TCCACTGGGA
TTAAATTTAC CTAATATTGC ACAATCAATG GATTCAAGTG ACTTGATCTA G
 
Protein sequence
MRIHPSWFLV FLYFTLSAKD QFETLLNGQA SIWNGWVIGA STSSLLFLSV LLHELAHSFV 
AIGEGLKVRD ITLFFLGGMA SLEKECPTSK GSLKIAISGP VVSLLLAFLM ILLSNNLSVS
NFILSNLFKQ VGSLNLLIGV FNLLPIMPLD GGVILKSLIW YFTGSKRAGI KVAIGSARLI
SFLAIFIGIL SLLRGNFYLS ICFSIIGLFV FSSSKSQSQI IQIQKILSEL YVNQVCSRSF
RVLEDDLPVK VLSKYSSFNK DNFSNEVWIL LCREGRWVGY VNEKILKNIS VQNWDKKFLY
EFSQPINELP SISEKESLWK AILKIEKTKD GRLLVLSFSG LPLGTLDRVD LGKAVLKKIG
LNLPDQLIKI ARKENIYPLG LNLPNIAQSM DSSDLI