Gene PMN2A_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1856 
Symbol 
ID3607268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp514065 
End bp515225 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content34% 
IMG OID637688749 
ProductXisA-like site specific recombinase 
Protein accessionYP_293047 
Protein GI72383692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGA ATCAAAAGTT ACTAGATATC AACCATGACC TTGAATCAAA GGGAATCAAT 
CTAAGAATTG AGAAAAGGGG TAAAGTTTTA AACATTCGTG GTTCTTTGCC AGATAAAAAA
TCTCATAATC TTTCTAAAGT TCAAAGAATA AGTCTGAAAC TTCCACACGA CATTAACGGT
CTAGAAGAGG CTAGAAAAGC TATAGAATTG ATAGATTTTC AACTTAAAAA AAATCAATTT
TGTTGGTCTA ATTGGATTAA AGAGAAAGCT CTCTCATCAA CAAAGACTAA TAAAACCGTA
ATAAGCAATG AAATAGAAAG TTTTAAAAGA CAATTTTTTT CTGATACATC CAGGAGCAAA
TCATCAGCCG GAATGATCAG CACTTGGCAG TCTGCTTACA AACCCTATTT GAACAGATTA
ATTGCAGTAA GTCATAAATC TACTCTTAAA TTAAGCGAGG AGCTCCTAGT GAAAATCCTT
TTAAGTTACA GAGAAAATTC AAGGAGCAGG CAACAATGTG GAATTGCTTT AAGTGCTTTA
GCTAGGCACC TTAAAGTAGA GCTACCCAAG AACTGGAAGC AACTTCAAAG TGGTTATGGA
ATACACGAAT CAAATTTCAG AGAGTTACCT AGTGATAAAG AAATTATTAA TAGCTTTCAA
TTAATACCAA ATCCAAAATG GAGATTTGTT TATGCGTTAA TGGCAACTTA TGGGCTTAGA
AATCATGAAG TCTTTTTTAG TGACTTATCT TGTTTAAAAA AAGGTGGGGA TAAAATACTC
CGGGTTTTCC CAAATACGAA GACAGGAGAG CATCAAGTTT GGCCATTTCA TCCTGAATGG
GTTGCTTTAT TTGAGCTAGG GAACATAACT GATACTTCAG ATTTACTCCC AGATATTAAA
ACAGATCTAA AAGAGACAAC TCTTCAACAT ATAGGAAGAA GAGTATCTGA GCAATTTAGA
AGATATGAAA TATCTTTTAC CCCCTATGAT TTAAGACATG CATGGGCAGT TAGGACCATC
TTAATAGGCC TACCAAATAC TGTAGCTGCA AAAATGATGG GACACTCAGT GTCAATACAT
ACAAAAACCT ATCATCATTG GATAACAAGA AGAGATCAGC AAATTGCAGT CGATAGTGCT
CTATCTAGAG TCAAATATTA A
 
Protein sequence
MDENQKLLDI NHDLESKGIN LRIEKRGKVL NIRGSLPDKK SHNLSKVQRI SLKLPHDING 
LEEARKAIEL IDFQLKKNQF CWSNWIKEKA LSSTKTNKTV ISNEIESFKR QFFSDTSRSK
SSAGMISTWQ SAYKPYLNRL IAVSHKSTLK LSEELLVKIL LSYRENSRSR QQCGIALSAL
ARHLKVELPK NWKQLQSGYG IHESNFRELP SDKEIINSFQ LIPNPKWRFV YALMATYGLR
NHEVFFSDLS CLKKGGDKIL RVFPNTKTGE HQVWPFHPEW VALFELGNIT DTSDLLPDIK
TDLKETTLQH IGRRVSEQFR RYEISFTPYD LRHAWAVRTI LIGLPNTVAA KMMGHSVSIH
TKTYHHWITR RDQQIAVDSA LSRVKY