Gene PMN2A_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1852 
Symbol 
ID3607264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp510735 
End bp511865 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content36% 
IMG OID637688745 
ProductNAD binding site 
Protein accessionYP_293043 
Protein GI72383688 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCCTCA TAGATGTTGC CATTATTGGA GGGGGAGCAT CAGGTACTAC TACAGCATTT 
CATCTGGCTA GTAATAGTAA AAAGGTATGT ATTCTTGAAA AAAATATTTT TTCTTCAGAG
AGAATTTGCG GGGGTGGAAT GTCTGCTGCA GTGCAAAACT GGTTTCCTTT TAAACTTTTA
CCAATAGTTG ATGAAGTAAT AACAAATGTA GAGTTTAGTT GGTGCAATAC CGACAAGGTA
GTCGCTGAGC TCTCGGGATC TTCTCCCTTT TGGATAGTTA AACGTGAAAA ACTTGATTCA
TTCTTATTAG ATCAAGCACT AAATTCTGGT TGTAATTTAT TGACTACTTT TAAGGTAGTC
GATATAAAAA AAAAATCTAA TGTCTGGCAT ATTACCGCTC TTGATGGGAG ACAAATAGAG
GCAAGAGCAG TTGTTATTGC TGATGGTTCT CAATCGCCAT GGCCTAAAAC TTTTAATTTA
GGTCCAACTC AACAGAAATT TGCCTCCACT TTCTCAGGGA GAATTAAAAG GAGGGGAAAT
TTAAGGAATG AAACTGCTAG ATTTGAATTT GGTCTAGTAA AAAATGGATT TGCATGGGCC
TTTCCATTAG ACAATGAAGT AAATATTGGG ATGGGAACTT TCCTAGATAA TAAGAATTCA
CTTCCAGTTA ATGAAATACT TAAATCATTT CTTCCTGATT TATGTTTTGA TCCTTCTGAA
GTAATTGGTC ATGAAAAAAA ATTAAGGATA TGGAATGGCC ACTGTAAATT AAACGGAGAA
GGAATTCTCT TGGTTGGCGA TGCCGCCTCA TTATGTGATC CCTTTTTAGC GGAAGGATTA
AGGCCCGCTT TGATGAGTGG ATTTGAAGCT GCAAAAAGCC TTATTTATTG GCTAGATGGA
GAAGTGAATT GTTTAGACGC ATATACAAAT ACGATGCAAA TAAACTGGGG GAATTCGATG
GCTTGGGGTA AAAGAATTTC TCAAGTTTTT TATCGTTTTC CCAAAGTCGG ATACCAATTA
GGTGTAAAAA GGCCTACTGC TCCAAAAAGA ATTGCACAAA TTCTTTCAGG TGAGATGAGT
TATGAAGACA TTGCAAAAAG AGTAATCAAG CGATTACTCT TTCAAAATTA A
 
Protein sequence
MTLIDVAIIG GGASGTTTAF HLASNSKKVC ILEKNIFSSE RICGGGMSAA VQNWFPFKLL 
PIVDEVITNV EFSWCNTDKV VAELSGSSPF WIVKREKLDS FLLDQALNSG CNLLTTFKVV
DIKKKSNVWH ITALDGRQIE ARAVVIADGS QSPWPKTFNL GPTQQKFAST FSGRIKRRGN
LRNETARFEF GLVKNGFAWA FPLDNEVNIG MGTFLDNKNS LPVNEILKSF LPDLCFDPSE
VIGHEKKLRI WNGHCKLNGE GILLVGDAAS LCDPFLAEGL RPALMSGFEA AKSLIYWLDG
EVNCLDAYTN TMQINWGNSM AWGKRISQVF YRFPKVGYQL GVKRPTAPKR IAQILSGEMS
YEDIAKRVIK RLLFQN