Gene PMN2A_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1848 
Symbol 
ID3607260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp505940 
End bp507286 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content34% 
IMG OID637688741 
Productmetal-dependent membrane protease 
Protein accessionYP_293039 
Protein GI72383684 
COG category[R] General function prediction only 
COG ID[COG1266] Predicted metal-dependent membrane protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.11501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAG CCAAAACTGG TTGGAAATGG GCGATCGCTC TATTTTCATT ACTTTTAACT 
GTTCTGATAT GGCAACAAGG TTTGCAAGAA AGCTTTGAAC GACCCTCAGT AGCTCCAAAG
ATTTCTTTGA TGCAAACTGA GATGGCAGTG TCAGCTTCTT CATCTTTACC TGAAACAATA
CAAGAAGTAT TTTTAGGTTC AGAACCTCAA AAAAAACTTT ATCAAGCCCT CAGTGACATT
CCTTTGGAAC AAATAGAGGA TAGAGAAAGA TTGTTACTAG CAATTCTGGA AGAGTCTGAG
AGTGAGCAAA AATTTATGTT GATGAAAGAT TTTAATGATA AAAAGTTTGA AACAATTAAA
GGCTATATAT TGGATAGACA ACAAGGTAAA GAACTATATA AATTTCCTGA TTTTGATGAG
ATTAAATTAG ACCCTTTACT TTATCAAATT TCATGTTCCA ACTTGGGATT TACTGATGAA
AAATGTATTA ATCAAAAATA TAATTCCCTA ACAGCTATAA GGCTTTTAAC TTCACAATTA
TTTCCATTTT TTGCTTCTGT TATAGGGAGT ATATTCTTGA TTAGGTATGC TTTCGTTTTC
TTAAGAAAGA AAAATACTCC ATGGCCAGAA ATGATATCCC CCCCCCTATC ATTAATAGAT
ATGGTTCTTC TAATCTCTGG TGGTTTCGTT GTTATTGGTG AAGTCGTTTT CCCCGCACTA
ATTATACCAA TAACAGATTT ATTGTTTAAT AATTTATCCT CTCCATTAAA CCAATCTCTA
AGAGTATTTA TTGGTTACTG TTCAATGACT ATAGCTCCTT TATTTATAAT TAGATATCAA
TTAATGGGTT TAGTTCCTTC GGGGATTGAT GGAGGTTGGC TTCAATGGAA AATCAGACCA
ATCAAAGAAG GACTTTTTAA ATCAATAAGT GGATGGTTAA TGATTATGCC TTTAGTGCTG
CTTATTGGAT GGCTAATGAA TGAGATTATT GGTGACCAAG GAGGAAGTAA TCCTCTATTG
GAATTGGTTT TAGGTAGTGA TGAATTCTTT CCATTATTTT TGCTTTTGAT TACAACTGTT
GTTTTGGCTC CAGTTTTTGA GGAGTTAGTT TTTAGGGGTA TTCTTTTGCC TGTATTGGTA
TCCAAAGTTG GCAAAGCTAG CGGAGTTTTA TTAAGTGCCT TGATCTTTGC TTTAGCTCAT
TTAAGTGTAG GGGAATTACC TCCTCTATTT GTATTAGGAA TTGGTCTTGG TTTGATGAGA
TTGAGCTCAG GAAGGTTATT TCCTTGTGCT CTTATGCATT CCCTCTGGAA TGGAGTCACT
TTTATTAGTC TACTATTAGT AGCTTGA
 
Protein sequence
MRQAKTGWKW AIALFSLLLT VLIWQQGLQE SFERPSVAPK ISLMQTEMAV SASSSLPETI 
QEVFLGSEPQ KKLYQALSDI PLEQIEDRER LLLAILEESE SEQKFMLMKD FNDKKFETIK
GYILDRQQGK ELYKFPDFDE IKLDPLLYQI SCSNLGFTDE KCINQKYNSL TAIRLLTSQL
FPFFASVIGS IFLIRYAFVF LRKKNTPWPE MISPPLSLID MVLLISGGFV VIGEVVFPAL
IIPITDLLFN NLSSPLNQSL RVFIGYCSMT IAPLFIIRYQ LMGLVPSGID GGWLQWKIRP
IKEGLFKSIS GWLMIMPLVL LIGWLMNEII GDQGGSNPLL ELVLGSDEFF PLFLLLITTV
VLAPVFEELV FRGILLPVLV SKVGKASGVL LSALIFALAH LSVGELPPLF VLGIGLGLMR
LSSGRLFPCA LMHSLWNGVT FISLLLVA