Gene PMN2A_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1820 
Symbol 
ID3607232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp479344 
End bp480567 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content32% 
IMG OID637688713 
Producthypothetical protein 
Protein accessionYP_293011 
Protein GI72383656 
COG category[S] Function unknown 
COG ID[COG1641] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00299] conserved hypothetical protein TIGR00299 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.493848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA TTTTTATTGA TTGTAGTCTT GGAATATCTG GAGATATGCT CGCATCAGCT 
TTATTCGATT TAGGTGTTCC ACACTCTATT TTCTTGGATA ACTTAGTAAG TTTAAATATA
GATAAAAATT ATAAACTAAA ATTTGAAGCG GGAGATAGTG ATGGCATAAA AGGCATTGTC
TGTAAAAAAA ACGAAATTCA ATTTAAGGAA TTATCTAGAA GTCTTAATGA GATAAAGAAC
TTACTTCTCG ATTCAAGCTT GAATGATTAT GTGAAGAAAA AGTCTATTAA GGTTTTTGAA
ATTCTTGCTG AAGCTGAAGC AGTTGTTCAC GGGAATCAAA TCTCAGATGT TCATTTTCAT
GAACTAGGTT CAATAGATTC CATCCTTGAT ATTGTTAATG TTTGCTCAGC GATAGACTTT
TTAAAGCCAT ACAAAATTTA TTTTTCAAAT CCACCTTCTG GGAAAGGAAT TGTATCCACT
TCACATGGCC CTATGCCTGT TCCAGTGCCT ACTGTTTTAG AGATAGCGAG GCAAAATGAA
ATCCCATTAA TGGTGCTTGA TGATAAATAT TTTGGTGAAA TAACAACTCC TACTGGCATC
GCATTGATAG CAACTTTTAT AGATAAGTTT GGCCAACCAA GTAATCTAAA TATTCAAAAT
ATTGGTATTG GCTTAGGAAG TAAAAATATA TCTCGTCCTA ACTTTTTACG TATTCTGCTA
ATAGATGAAA ATGATTATTA TATGGAAAAT AATAAACCCT CTAATGAAAA TATAATTTCT
CAGGAGGCTT GGATTGATGA TTCTACTCCT GAAGATGTTG CTGTTTTAAT CGATAGATTA
AGGTCTGCAG GTGCCATAGA TGTTATTTGT TATTCGGTCG ATATGAAAAA AAATAGAAAA
GGTATATGTA TACAAGCTAT TGTCTACCCA AAGCATAAAA ATTTACTGCG TGAAGTTTGG
TTTAACTACA GTACAACAAT TGGAATAAGA GAAAATAATA TTAGCCGCTG GATACTTCCA
AGAAGAATAG TGAGTCATAA AACTAAATTT GGGACAGTTA ATGTTAAGCA AGTAATGAGA
CCAAATGGTC AGACTTCAAT AAAAATAGAA CATAAAGACT TGACTCGAAT AACTTTAAAT
ACAGGAATCC CAATAGAAGA AATACGTCAG AAATTAATCA TAGAATTATC AGAATTTTAT
GAAATCGATG ATTGGTCTTT TTGA
 
Protein sequence
MKSIFIDCSL GISGDMLASA LFDLGVPHSI FLDNLVSLNI DKNYKLKFEA GDSDGIKGIV 
CKKNEIQFKE LSRSLNEIKN LLLDSSLNDY VKKKSIKVFE ILAEAEAVVH GNQISDVHFH
ELGSIDSILD IVNVCSAIDF LKPYKIYFSN PPSGKGIVST SHGPMPVPVP TVLEIARQNE
IPLMVLDDKY FGEITTPTGI ALIATFIDKF GQPSNLNIQN IGIGLGSKNI SRPNFLRILL
IDENDYYMEN NKPSNENIIS QEAWIDDSTP EDVAVLIDRL RSAGAIDVIC YSVDMKKNRK
GICIQAIVYP KHKNLLREVW FNYSTTIGIR ENNISRWILP RRIVSHKTKF GTVNVKQVMR
PNGQTSIKIE HKDLTRITLN TGIPIEEIRQ KLIIELSEFY EIDDWSF