Gene PMN2A_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1815 
Symbol 
ID3607227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp474908 
End bp475711 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content36% 
IMG OID637688708 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_293006 
Protein GI72383651 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.11992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTC CATTTCGTAA TGTGACTCCG AATGGACCAG GTGGCACAAC AACTCTTCTA 
CTTGTCCTTT CCTTTACTGG TTTTTTACTT CTTACTCAAG CATTTTTTGT CGTTCCGGCT
GGTCAGGTTT CAGTAGTAAC TACATTAGGA AAAGTCAGTG GGGGCTCACG CAAACCTGGT
TTGAATTTTA AAGTTCCTTT TGTTCAAAAT ACCTATCCAT TTAATGTGCA AACTCAAGTT
AGACCAGAAA AATTTGATTC ATTAACAAAA GATTTGCAAG TTATTTCTGC AACCGCCACT
GTTAAATATG CTCTAAAACC TAATGAGGCT GGAAGAGTCT TTAAAACTAT CTCTTATAAC
GACAGAGAGA TATATAACAG GATTATTCAA CCATCACTAC TTAAAGCACT CAAGTCAGTC
TTCTCAAAGT ATGAGTTGGT AACCATAGCT AGTTCTTGGA GTGATATTTC AGAATTAGTA
GAGGATACGG TTGCAGAGGA ACTAAATAAG TTTGACTATG TTGATGTTCA ATCTCTTGAT
TTAACTGGTT TAACAATTGC AGATGAATAT CGAGCAGCTA TTGAACAAAA ACAGATTGCT
GAGCAGCAAT TATTGAGAGC TCAAACCGAA GTTAAAATTG CAGAGCAAGA AGCTCTTAGA
TACGACACTC TAAATAAAAG TCTTGATGAT CAAGTTCTTT TCAAATTGTT TTTAGATAAA
TGGAATGGTG AGACACAAGT TGTTCCTTCA TTGCCAGGAA ACGGTTCAGG AAATGTTCCT
GTAATTGTTA GAGGAAAAAA CTAA
 
Protein sequence
MTTPFRNVTP NGPGGTTTLL LVLSFTGFLL LTQAFFVVPA GQVSVVTTLG KVSGGSRKPG 
LNFKVPFVQN TYPFNVQTQV RPEKFDSLTK DLQVISATAT VKYALKPNEA GRVFKTISYN
DREIYNRIIQ PSLLKALKSV FSKYELVTIA SSWSDISELV EDTVAEELNK FDYVDVQSLD
LTGLTIADEY RAAIEQKQIA EQQLLRAQTE VKIAEQEALR YDTLNKSLDD QVLFKLFLDK
WNGETQVVPS LPGNGSGNVP VIVRGKN