Gene PMN2A_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1802 
Symbol 
ID3607212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand+ 
Start bp464412 
End bp465482 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content36% 
IMG OID637688693 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_292993 
Protein GI72383638 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATAA TTTTATCCCT CGAAACAAGT TGTGACGAGT CTGCAGCGGC TTTGGTTTCT 
AATGAAAAAG GAAAAATTGA TTTGTTAGCT AATGAAATAG CTTCACAAAT TGATGAACAT 
GCTAATTGGG GTGGTGTTGT TCCAGAAATC GCTTCAAGAA GACATTTAGA AAACCTTCCA 
TTTTTAATTG AAGAGGTTTT TGCAAAATCA AAATTACAGA TAAAAGATAT AGATGCAGTA 
GCCGCAACTG TTACTCCAGG ATTAGCAGGA TCACTGTTGG TCGGATCAAT TACGGCAAGA 
ACTTTAGCTA ATTTACATCA AATTCCATTC TTAGGTATCC ATCATTTGGA GGGACATCTT 
TCCTCGATAT ATTTGTCAGA AAAACATCCT AAACCTCCTT TTTTAGTCTT ATTGGTTAGT 
GGAGGACACA CTGAATTGAT AAAAGTAGAT GTTAAACATA AGTATCAACG TCTTGGTAGA 
AGTCATGATG ATGCAGCTGG AGAAGCTTTT GATAAGGTTG CAAGACTTTT GGGACTTTCA 
TATCCAGGGG GCCCTGCAAT TCAAAAAATA GCTAAATCGG GAGACCCAAA AAAATTTTTA 
TTTCCAAAAG GAAGAGTCTC TAAACCTGAA GGTGGTTTTT ATCCATATGA CTTTTCTTTT 
AGTGGTTTAA AAACGGCTGT ATTTCGCCAG ATAGAAAAAA TTAGATCAGA AAATAAAAAA 
TTACCAATAG AAGATATTGC TGCAAGTTTT GAATACATAG TGGCTGAGGT CTTAGTAGAG 
AGGAGCTTTA AATGTGCCCT TGACCAAGGT TTAAATTCTC TTGTTTTAGT TGGAGGAGTT 
GCTGCAAATG TGAGATTAAG GGAAATGATG CTTGCAAAAG CATCTGAAAA TTCAATTGAT 
ATTACTCTTG CACCAATGGA ATTTTGTACT GATAATGCGG CAATGATTGG GGCGGCAGCT 
TTGTTAAGAT TGTCATCTGA AAGCTTTAAA AGTTCAATGG AATTAGGTGT ATCTGCTCGA 
TGGCCACTAG AAAAATCTGA TTTACTTTAT GATCCGATTC CTCCTTTTTA A
 
Protein sequence
MSIILSLETS CDESAAALVS NEKGKIDLLA NEIASQIDEH ANWGGVVPEI ASRRHLENLP 
FLIEEVFAKS KLQIKDIDAV AATVTPGLAG SLLVGSITAR TLANLHQIPF LGIHHLEGHL 
SSIYLSEKHP KPPFLVLLVS GGHTELIKVD VKHKYQRLGR SHDDAAGEAF DKVARLLGLS 
YPGGPAIQKI AKSGDPKKFL FPKGRVSKPE GGFYPYDFSF SGLKTAVFRQ IEKIRSENKK 
LPIEDIAASF EYIVAEVLVE RSFKCALDQG LNSLVLVGGV AANVRLREMM LAKASENSID 
ITLAPMEFCT DNAAMIGAAA LLRLSSESFK SSMELGVSAR WPLEKSDLLY DPIPPF