| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1786 |
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| Symbol | ispD |
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| ID | 3607196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 451617 |
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| End bp | 452294 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637688677 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_292977 |
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| Protein GI | 72383622 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCATTTGT TAATTGCGGC GGCAGGGAGT GGAAGTCGAA TGGGTGCTGA TAGAAATAAA
CTCCTTTTGA AGGTTGCAGG TAAGACGGTT TTAGAATGGA CTTTAAAAGC AGCTTTCGAG
GCTAAAACAA TTTCTTGGAT TGGAATTATT GGACAACCCA AAGATAAAAA TCCCATTTGT
TCAATTCTTG ATAACTCAGT AAAGGCAGTT CAATGGATCA ATGGAGGATC AACAAGACAG
CAGTCAGTTC AACTGGGATT AGCTGCTCTT CCAAATGATG CAAAGTCTGT GCTGATTCAT
GATGGAGCAA GATGCTTGGT GAGATCATTC GTTTTTGATG AGATCTCAAA GATTGTTTCC
AAGGGACAAT CTGTTATTGC TGCTTCACAA GTCACTGACA CCATAAAAAA GGTTGATATA
GATGGTGAGA TTATTGAGAG CCCTCCTCGC TCAGATTTAT GGGCTGCGCA GACACCTCAG
GGTTTTCCAG TAAATAAACT GAAGCATGCT CATAGTGAAG CAATCTCCAA AGGATGGAAT
GTAACCGATG ATGCATCCTT GTTTGAACGT TTAGGATTGC CAGTGAAAAT ATATGATGCA
GGACCTTCAA ATATTAAAGT GACAACTCCA TTTGATCTCG TAATAGCAGA GTCTTTATTG
TCTACTTTAA AAGACTAA
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| Protein sequence | MHLLIAAAGS GSRMGADRNK LLLKVAGKTV LEWTLKAAFE AKTISWIGII GQPKDKNPIC
SILDNSVKAV QWINGGSTRQ QSVQLGLAAL PNDAKSVLIH DGARCLVRSF VFDEISKIVS
KGQSVIAASQ VTDTIKKVDI DGEIIESPPR SDLWAAQTPQ GFPVNKLKHA HSEAISKGWN
VTDDASLFER LGLPVKIYDA GPSNIKVTTP FDLVIAESLL STLKD
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