Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1783 |
Symbol | groEL |
ID | 3607193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 448710 |
End bp | 450392 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637688674 |
Product | chaperonin GroEL |
Protein accession | YP_292974 |
Protein GI | 72383619 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAC TTCTAAGTTT TTCAGACGAA TCTCGCGGTG CTCTCGAAAA AGGAGTAAAC AATCTAGCCA ACGCTCTAAA AGTCACAATT GGACCTAAAG GTAGAAATGT TGTTATTGAA AAAAAATTTG GAGCCCCAGA TATTGTTAAT GATGGAGTAA CTATTGCAAA GGAAATAGAT CTTGAAGATC CATTTGAAAA TATAGGAGCA AAGCTCATTG AACAGGTTGC ATCAAAAACG AAAGAAAAAG CTGGAGATGG AACAACTACT GCAACAGTTT TAGCGCAATT TATGGTTCAA GAAGGTTTGA GAAATACAGC CGCCGGAGCC AGCCCAATCG AATTAAGAAG GGGAATGGAA AAGGCTGTAG CTCAAATAGT TGATGATTTA AAGAAAAAAA GTAAATCAGT CAGTGGTGAT GCTATTAAAC AAGTTGCGAC AGTAAGTGCC GGTGGAGACG AGGAAATAGG TTCAATGATT GCAGATGCAA TAGATAAGGT AAGTTTTGAT GGAGTTATAA CTGTTGAGGA ATCCAAATCT CTAGCCACCG AATTAGATAT CACTGAGGGA ATGGCATTTG ACAGAGGCTA TAGCTCTCCA TATTTTGTGA CAGATGAAGA TCGATTAATT TGCGAATTTG AAAATCCTTC AATCCTAATT ACTGACAAAA AGATTTCATC AATTGCCGAT CTCATTCCTG TTCTAGAAAC AGTTCAAAAG AACGGAACAC CATTAATAAT TCTTGCAGAA GAAGTAGAGG GTGAAGCATT AGCCACATTA GTAGTTAATA AAAATCGTGG TGTTTTACAG GTAGCAGCTG TTAGAGCTCC ATCATTTGGC GAGAGACGAA AAGCTGCACT TGGAGATATT GCAGTATTAA CTGGCGGCAC ATTAATAAGC GAAGACAAAG CAATGAGTCT TGAGAAAGTT CAAATTTCTG ACCTAGGTCA AGCAAGAAGA GTAACAATTA CAAAAGACAG CACAACAATT GTCGCAAATG AGGCTCAAAA CACCGAATTA TCAAATCGCA TTGCCTCAAT CAAGAGAGAA CTTGAAGAGA CAGACTCTGA GTACGATCAA GAGAAATTAA ATGAGAGAAT AGCTAAACTT GCTGGCGGTG TAGCTGTAAT TAAAGTCGGA GCTCCAACTG AAACTGAGTT AAAAAACAGA AAGCTCAGAA TTGAGGATGC TCTGAATGCA ACTCGTGCAG CCATTGAAGA AGGTATTGTT GCTGGTGGTG GAACAACTCT TTTAGAGCTG AGTGAAGGGC TTGGAGATTT AGCTAAAAAG CTAGAGGGTG ATCAGAAAAC TGGAGTTGAA ATTATAAAAA GAGCATTGAC TGCTCCAACA AAACAGATAG CTATAAATGC TGGATTTAAC GGAGATGTTG TTGTTTCAGA TATCAAGCGT TTAGGCAAAG GCTTCAATGC ACAAACTGGA GAGTACGAGG ATTTGCTTGA AGCAGGGATC TTAGATGCTT CAAAAGTAAT ACGGCTTGCT CTTCAAGATG CTGTATCAAT TGCTTCACTT CTCATAACTA CTGAAGTTGT TATTGCTGAC AAACCTGAGC CCCCATCAGC ACCAGGAGCT GAAGGTGGAG ACCCAATGGG CGGAATGGGC GGAATGGGCG GAATGGGCGG AATGGGCGGA ATGGGCGGAA TGGGAATGCC AGGAATGATG TAA
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Protein sequence | MAKLLSFSDE SRGALEKGVN NLANALKVTI GPKGRNVVIE KKFGAPDIVN DGVTIAKEID LEDPFENIGA KLIEQVASKT KEKAGDGTTT ATVLAQFMVQ EGLRNTAAGA SPIELRRGME KAVAQIVDDL KKKSKSVSGD AIKQVATVSA GGDEEIGSMI ADAIDKVSFD GVITVEESKS LATELDITEG MAFDRGYSSP YFVTDEDRLI CEFENPSILI TDKKISSIAD LIPVLETVQK NGTPLIILAE EVEGEALATL VVNKNRGVLQ VAAVRAPSFG ERRKAALGDI AVLTGGTLIS EDKAMSLEKV QISDLGQARR VTITKDSTTI VANEAQNTEL SNRIASIKRE LEETDSEYDQ EKLNERIAKL AGGVAVIKVG APTETELKNR KLRIEDALNA TRAAIEEGIV AGGGTTLLEL SEGLGDLAKK LEGDQKTGVE IIKRALTAPT KQIAINAGFN GDVVVSDIKR LGKGFNAQTG EYEDLLEAGI LDASKVIRLA LQDAVSIASL LITTEVVIAD KPEPPSAPGA EGGDPMGGMG GMGGMGGMGG MGGMGMPGMM
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