Gene PMN2A_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1783 
SymbolgroEL 
ID3607193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp448710 
End bp450392 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content40% 
IMG OID637688674 
Productchaperonin GroEL 
Protein accessionYP_292974 
Protein GI72383619 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC TTCTAAGTTT TTCAGACGAA TCTCGCGGTG CTCTCGAAAA AGGAGTAAAC 
AATCTAGCCA ACGCTCTAAA AGTCACAATT GGACCTAAAG GTAGAAATGT TGTTATTGAA
AAAAAATTTG GAGCCCCAGA TATTGTTAAT GATGGAGTAA CTATTGCAAA GGAAATAGAT
CTTGAAGATC CATTTGAAAA TATAGGAGCA AAGCTCATTG AACAGGTTGC ATCAAAAACG
AAAGAAAAAG CTGGAGATGG AACAACTACT GCAACAGTTT TAGCGCAATT TATGGTTCAA
GAAGGTTTGA GAAATACAGC CGCCGGAGCC AGCCCAATCG AATTAAGAAG GGGAATGGAA
AAGGCTGTAG CTCAAATAGT TGATGATTTA AAGAAAAAAA GTAAATCAGT CAGTGGTGAT
GCTATTAAAC AAGTTGCGAC AGTAAGTGCC GGTGGAGACG AGGAAATAGG TTCAATGATT
GCAGATGCAA TAGATAAGGT AAGTTTTGAT GGAGTTATAA CTGTTGAGGA ATCCAAATCT
CTAGCCACCG AATTAGATAT CACTGAGGGA ATGGCATTTG ACAGAGGCTA TAGCTCTCCA
TATTTTGTGA CAGATGAAGA TCGATTAATT TGCGAATTTG AAAATCCTTC AATCCTAATT
ACTGACAAAA AGATTTCATC AATTGCCGAT CTCATTCCTG TTCTAGAAAC AGTTCAAAAG
AACGGAACAC CATTAATAAT TCTTGCAGAA GAAGTAGAGG GTGAAGCATT AGCCACATTA
GTAGTTAATA AAAATCGTGG TGTTTTACAG GTAGCAGCTG TTAGAGCTCC ATCATTTGGC
GAGAGACGAA AAGCTGCACT TGGAGATATT GCAGTATTAA CTGGCGGCAC ATTAATAAGC
GAAGACAAAG CAATGAGTCT TGAGAAAGTT CAAATTTCTG ACCTAGGTCA AGCAAGAAGA
GTAACAATTA CAAAAGACAG CACAACAATT GTCGCAAATG AGGCTCAAAA CACCGAATTA
TCAAATCGCA TTGCCTCAAT CAAGAGAGAA CTTGAAGAGA CAGACTCTGA GTACGATCAA
GAGAAATTAA ATGAGAGAAT AGCTAAACTT GCTGGCGGTG TAGCTGTAAT TAAAGTCGGA
GCTCCAACTG AAACTGAGTT AAAAAACAGA AAGCTCAGAA TTGAGGATGC TCTGAATGCA
ACTCGTGCAG CCATTGAAGA AGGTATTGTT GCTGGTGGTG GAACAACTCT TTTAGAGCTG
AGTGAAGGGC TTGGAGATTT AGCTAAAAAG CTAGAGGGTG ATCAGAAAAC TGGAGTTGAA
ATTATAAAAA GAGCATTGAC TGCTCCAACA AAACAGATAG CTATAAATGC TGGATTTAAC
GGAGATGTTG TTGTTTCAGA TATCAAGCGT TTAGGCAAAG GCTTCAATGC ACAAACTGGA
GAGTACGAGG ATTTGCTTGA AGCAGGGATC TTAGATGCTT CAAAAGTAAT ACGGCTTGCT
CTTCAAGATG CTGTATCAAT TGCTTCACTT CTCATAACTA CTGAAGTTGT TATTGCTGAC
AAACCTGAGC CCCCATCAGC ACCAGGAGCT GAAGGTGGAG ACCCAATGGG CGGAATGGGC
GGAATGGGCG GAATGGGCGG AATGGGCGGA ATGGGCGGAA TGGGAATGCC AGGAATGATG
TAA
 
Protein sequence
MAKLLSFSDE SRGALEKGVN NLANALKVTI GPKGRNVVIE KKFGAPDIVN DGVTIAKEID 
LEDPFENIGA KLIEQVASKT KEKAGDGTTT ATVLAQFMVQ EGLRNTAAGA SPIELRRGME
KAVAQIVDDL KKKSKSVSGD AIKQVATVSA GGDEEIGSMI ADAIDKVSFD GVITVEESKS
LATELDITEG MAFDRGYSSP YFVTDEDRLI CEFENPSILI TDKKISSIAD LIPVLETVQK
NGTPLIILAE EVEGEALATL VVNKNRGVLQ VAAVRAPSFG ERRKAALGDI AVLTGGTLIS
EDKAMSLEKV QISDLGQARR VTITKDSTTI VANEAQNTEL SNRIASIKRE LEETDSEYDQ
EKLNERIAKL AGGVAVIKVG APTETELKNR KLRIEDALNA TRAAIEEGIV AGGGTTLLEL
SEGLGDLAKK LEGDQKTGVE IIKRALTAPT KQIAINAGFN GDVVVSDIKR LGKGFNAQTG
EYEDLLEAGI LDASKVIRLA LQDAVSIASL LITTEVVIAD KPEPPSAPGA EGGDPMGGMG
GMGGMGGMGG MGGMGMPGMM