Gene PMN2A_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1773 
Symbol 
ID3607183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand+ 
Start bp439830 
End bp440483 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content35% 
IMG OID637688664 
Productriboflavin synthase subunit alpha 
Protein accessionYP_292964 
Protein GI72383609 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0488322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTG GTTTAATTCA GGCTATTGGC ACGATCAAGA AAAATAATTT GGGGGTAATT 
GTTGATGGAT GTAACCCTTT CTCTCCGTTA AAACTTGGAG ATAGTGTATC TGTTGATGGA 
GTGTGTCTAA CAGTTTCTGA GTTGATGAAT GATTCTTTTT TCTCAAATAT AAGTGAAGAG 
ACTCTTAAGA GAACAAATCT TGCAGAAAAA GCTCAGAAAA ATGGTTATGT AAATCTTGAG 
CCAGCATTAC GTCTGTCTGA CCGCTTAGGT GGACATATTG TAAGTGGACA CATAGACGGG 
TTGGGTAAAG TTGTTTCAAT CGAAAATTTG AAAAATTCTT GGAATTTGAG AGTATCTTGG 
GATGATTTAA ACTTTTGCAG ATATATGTGC GATAAGGCGA GTATTAGCCT AAATGGAATA 
AGTCTTACTA TCGCTGAGAT CTATGTTGAT GGGTGTGAAT TTTCAGTAGC CGTAATACCT 
CATACGTGGT CAAATACATG CTTGAAGTTT TTGAAAATTG GAGAAAAGGT TAATTTGGAA 
GTTGACTTGA TGGCTAAGTA TGCAGAAAAA CTTCTAAAAG TAAATAATAA TGATTCCATT 
TCGAAACAAA GCCCAGTAAT TAATTCTCAG TGGCTAAGTG AGCAAGGTTG GTAA
 
Protein sequence
MFTGLIQAIG TIKKNNLGVI VDGCNPFSPL KLGDSVSVDG VCLTVSELMN DSFFSNISEE 
TLKRTNLAEK AQKNGYVNLE PALRLSDRLG GHIVSGHIDG LGKVVSIENL KNSWNLRVSW 
DDLNFCRYMC DKASISLNGI SLTIAEIYVD GCEFSVAVIP HTWSNTCLKF LKIGEKVNLE 
VDLMAKYAEK LLKVNNNDSI SKQSPVINSQ WLSEQGW