Gene PMN2A_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1770 
Symbol 
ID3607180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand+ 
Start bp436849 
End bp437535 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content38% 
IMG OID637688661 
Producthypothetical protein 
Protein accessionYP_292961 
Protein GI72383606 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACTTAG ACAATAAAAA CTCTTTAAAA AGTAGATCTC TTTATAAAGC CCCTCTAAGT 
AAGAGACAAG CTTTGAAAAT CGTTGAGTCC TCTTATCTTG CGGCTGCAAC AGCTTTGATT 
TGGATAGCTC TTTATTATTT GCCTATTGGC GGAGCTGTTT TTCGTCTTGC TTTACCATTG 
CCATTGGCTC TTCTTCAAAT TCGGAGAGGT GTCAAAACAG GTATTGAGGG AGTGACAATA 
TGCGTAATGC TATTAACTGT TCTGATGGGT CCGCTAAGAG GACCTTTAGT GCTTTTTCCG 
TATGGATTGC TTTCCTTATG GTTAGGATAT TGTTGGGAAA AGGGATGGAA TTGGTGGTTA 
AGTTGGAGTG TTGGAGTCTC GATTGGAACG ATGGGTTTTC TTGTTAGGGT TTTCGTCTTG 
TCTTTGTTGG TTGGTGAGAA TCTATGGGTT ATTCTTACTC GTGCTGGAGC GGGATTGCTT 
GAAAAAGGAA TAGATATTTT TAATCTTTCT TTTACTCCCG ATATGAGACA AGTTCAAATA 
GTTGCACTAT GTCTAATTAT TACTCAAGAA ATCATTTACG TTCTATGTTT GCATGCTTTG 
GCTTATTGGA TTTTCCCTAG ACTCAAGTCA TCTATACCTG AACCACCCGC TTTGCTAGAA 
AAATTAATTT CTCTAGAATC TAACTGA
 
Protein sequence
MNLDNKNSLK SRSLYKAPLS KRQALKIVES SYLAAATALI WIALYYLPIG GAVFRLALPL 
PLALLQIRRG VKTGIEGVTI CVMLLTVLMG PLRGPLVLFP YGLLSLWLGY CWEKGWNWWL 
SWSVGVSIGT MGFLVRVFVL SLLVGENLWV ILTRAGAGLL EKGIDIFNLS FTPDMRQVQI 
VALCLIITQE IIYVLCLHAL AYWIFPRLKS SIPEPPALLE KLISLESN