Gene PMN2A_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1758 
Symbol 
ID3607168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp424727 
End bp426043 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content37% 
IMG OID637688649 
ProductFmu, rRNA SAM-dependent methyltransferase 
Protein accessionYP_292949 
Protein GI72383594 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGCT TAGATGCCAG AAAAGCTGCT TGGGATGTTA TCCAAGCCGT AGGTGGAGGT 
GCATTCGCAG ATGTTGCTTT GGAAAGGATT TTTAATCTTT ATTCCTTTAA GTCGATAGAT
AAAGGATTGA TAACTGAACT TTCTTATGGT GCAATTCGCC AAAGATATTA TTTAGATTGT
TGGATTGATT ATTTAGGGAA AGTACCAGCT AAGAAACAAC CTCCTTTATT GAGATGGTTA
TTGCATCTTG GCCTATATCA GGTTTTAAAA ATGAAGAGAA TACCTCCAGC GGCTGCAATC
AATACAACTG TAGAGCTTGC GAAAACTTAT CATTTAAAAA AGCTGGCTCC CGTTGTTAAT
GGAATTTTGC GATCTGCTCT TAGAAGCAAA GAGAGAGGTC TCTTGTTGCC TAAATCAAAT
AATCCTAGTT TAGAACTAGC AAAAAACGAA TCCCTACCTC TTTGGTTGGC AGATGAATTG
ATTAAGTGGA AGGGATTAGA AGATGCTAAG AAGATTGCTA AAGCATTTAA CTGTATTAGT
CCTATTGATA TAAGAGTGAA TAGATTGCGT GCAGATTTAA AAGAAGTAAA AGAAATTTTT
GATTCCTGTG GTATTCATAA TCAAGCGATA CCAAATTGTC CTTACGGATT GGAGGTTCGA
GCTGGTGTTG GTGAACCTAG AAAATGGCCC GGTTATGAAG AAGGAAAATG GAGTGTTCAA
GATAGATCTT CACAGTTAAT TGCCCCATCA TTAGGACCTC TACCTGGAGA AAAGATTCTT
GATGCTTGTG CTGCACCAGG CGGAAAATCA ACACATATTG CTGAATTAAT TAATAATGAG
GGCAATCTCT GGTCTGTTGA TCGATCATCA AGAAGATCTA AAAAAATATT AGCTAACTCA
GAGAGGCTTG GGACTAAATG CTTGCAAATA TTGGTTGCTG ATTCTAATGA GCTATTACTA
AAAAATCCTG ATTGGAAAGG TTTTTTTGAT CGTATATTAA TAGATGCTCC ATGCTCAGGA
TTGGGTACTC TTGCTCGCCA CCCTGATGCA AGATGGAGGA TGAATCAAGA TAATATTCAG
CAGCTTGTCG CTGTTCAAAG TCAGTTGCTT AACTCGTTAG CGCCCTTATT GAAAAATGGA
GGGAAGTTGG TTTATTCCAC TTGTACTATT CACCCTGAAG AAAATTCTCA TCAGATAAAA
AATTTTCTTC AATCAAAGTC TGAGTTTTTA TTGGAATATG AAAAACAGAT CTGGCCTGGA
GAGGGAGATA ATGGAGATGG TTTTTATATT TCTGTTTTAA ATAAATTAAA AAATTAA
 
Protein sequence
MKGLDARKAA WDVIQAVGGG AFADVALERI FNLYSFKSID KGLITELSYG AIRQRYYLDC 
WIDYLGKVPA KKQPPLLRWL LHLGLYQVLK MKRIPPAAAI NTTVELAKTY HLKKLAPVVN
GILRSALRSK ERGLLLPKSN NPSLELAKNE SLPLWLADEL IKWKGLEDAK KIAKAFNCIS
PIDIRVNRLR ADLKEVKEIF DSCGIHNQAI PNCPYGLEVR AGVGEPRKWP GYEEGKWSVQ
DRSSQLIAPS LGPLPGEKIL DACAAPGGKS THIAELINNE GNLWSVDRSS RRSKKILANS
ERLGTKCLQI LVADSNELLL KNPDWKGFFD RILIDAPCSG LGTLARHPDA RWRMNQDNIQ
QLVAVQSQLL NSLAPLLKNG GKLVYSTCTI HPEENSHQIK NFLQSKSEFL LEYEKQIWPG
EGDNGDGFYI SVLNKLKN