Gene PMN2A_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1756 
Symbol 
ID3607166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp422631 
End bp423320 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content38% 
IMG OID637688647 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_292947 
Protein GI72383592 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTCC TCCCTAGACG TTTCGAACGT ATAAAATCAG TATTAAATAG GAGGATTTCA 
GATCTCACAG TCTTAATTGA GAATGTTGAA AAGCCTCATA ATCTCTCAGC GATAATACGA
AGTTGTGATG CTGTTGGTGT TCTTGAAGCA TATGCAATCT TCAATAAGGA GAAGTTTTTA
ACATTTAATA GCACTGCTCA AGGAAGTCAA AAATGGGTCA AAATAAACCA ATATAAAAAG
ACCACTGAGG CGATAAAAGT TCTTAAAGAA AAAGGGTTTA AATTGTACGG AACGAACTTG
AATCCCAGAT CAATTGATTA CAGAAAATGT GACTTCAAGG GACCAACAGC ATTTGTGCTT
GGTGCCGAGA AATGGGGTAT CAGTGAAGAA GCTTCGAGTT TAATGGATGA GCATATTCAT
ATTCCAATGA GAGGGATGGT TGAATCTTTA AATGTATCAG TTGCGGCATC GGCATTATTG
TTTGAAGCGC TAAGGCAACG ACAAGTAGCC AATATGGTTC CTGAATCTGG GGAAGGCATG
AGCCAAGAAA CATACAAAGA AAAGCTTTTC GAGTGGGCTT ACCCCGAGGT TGCTCAATGG
TGCAAAAGTG AAGGCAGAAA ATATCCAGAA CTTAATTATA AAGGTGAGAT TATAGATAAT
CTCCCAAGAA CAGAAAAAAT GAGATATTAA
 
Protein sequence
MPLLPRRFER IKSVLNRRIS DLTVLIENVE KPHNLSAIIR SCDAVGVLEA YAIFNKEKFL 
TFNSTAQGSQ KWVKINQYKK TTEAIKVLKE KGFKLYGTNL NPRSIDYRKC DFKGPTAFVL
GAEKWGISEE ASSLMDEHIH IPMRGMVESL NVSVAASALL FEALRQRQVA NMVPESGEGM
SQETYKEKLF EWAYPEVAQW CKSEGRKYPE LNYKGEIIDN LPRTEKMRY