Gene PMN2A_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1754 
Symbol 
ID3607164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp419666 
End bp421477 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content38% 
IMG OID637688645 
ProductGTP-binding protein LepA 
Protein accessionYP_292945 
Protein GI72383590 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.570485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATG TGCCCATTTC TCGTCTGAGG AACTTCTGCA TAATTGCTCA TATTGACCAT 
GGTAAATCAA CCTTGGCAGA TAGGCTTCTT CAGGATACTG GCACTGTCTC CTCTAGAGAC
ATGCAAGAAC AATTCTTGGA TAATATGGAC CTTGAGAGAG AGAGAGGAAT AACTATAAAA
TTACAGGCTG CGCGGATGAA TTATAAAGCA GATGATGGAG AGGAATATGT TCTGAATTTG
ATTGATACTC CTGGCCATGT TGACTTCTCT TATGAGGTGA GTCGATCATT ACAGGCTTGT
GAGGGCGCCT TGCTGGTTGT TGATGCTAGT CAAGGAGTAG AAGCTCAAAC TTTGGCCAAT
GTTTACCTCG CCTTGGAAAA TGATTTAGAA ATTATTCCTG TTCTCAATAA AGTTGATTTG
CCCGGAGCTG ATCCTGAGAA AATCAAAAAT GAAATTGAAT CAATTATTGG TTTAGATACA
TCTAAGGCAA TTTCCTGTTC TGCTAAAACA GGGGTTGGTA TTCCAGAAAT ACTGCAAGCA
GTAGTAGATA GAATACCTTC TCCGAAAGAT AATACTGATC AAGCTACAAA AGCACTTATT
TTTGATTCCT ATTATGACCC TTACAGAGGC GTGATTGTTT ATTTCAGAAT CATGAGTGGT
GGCATAAGTA AGAAAGACAA GGTTTTGCTT ATGTCTAGTA AGAAAAGTTA TGAGTTAGAT
GAAATAGGTG TTATGGCACC TGATCAAGTA AAAGTAAATT CTCTTCATGC CGGTGAAGTT
GGATATTTAG CTGCATCTAT CAAAGCAGTT GCTGATGCGA GAGTAGGGGA TACGATTACG
TTGGTGGACA GACCTGCTCA AGATGCTTTG CCAGGTTATG CCGAAGCCAA ACCAATGGTT
TTTTGTGGAT TGTTTCCCAC GGATGCAGAT CAATATCCAG ATCTAAGAGA TGCTCTAGAT
AAATTGCAAC TATCCGATGC TGCATTGAAA TATGAGCCTG AAACAAGTAG TGCAATGGGA
TTTGGCTTTC GTTGTGGATT TTTAGGTTTA TTGCATATGG AAATTGTTCA AGAGCGTTTA
GAACGTGAAT ATGATTTAGA TTTAATCGTT ACTGCACCAT CAGTTATTTA TAAAGTGAAA
ATGATTGATG GAGAAATTAG AATGATCGAT AATCCAGCTA CACTTCCAGA CCCTCAAAAA
CGTGAAACCA TAGAAGAACC CTACGTCCGA ATGGAAATTT ATGCTCCCAA TGATTACAAC
GGTACCTTGA TGGGTCTTTG TCAGGATAGA AGAGGAGATT TTATCGATAT GAAGTACATA
ACGACTGATC GAGTGACGCT TATTTATGAA ATACCTCTTG CAGAAGTTGT GACAGACTTC
TTTGATCAGA TGAAAAGTAG AACTAAGGGA TATGCCTCTA TGGAATATCA CTTAATTGGT
TATAGGGAAA ATGATTTAGT CAGATTAGAC GTTTTAATTA ATTCAGAACG AGCAGACCCT
TTAACAACGA TTGTTCATAA AGATAACGCT TATGGTGTAG GGAAAGGACT TGTTGAGAAA
TTAAAAGAAC TTATTCCAAA ACAGCAATTT AAGATTCCTT TACAAGCTTC AATTGGGAGT
CGAATTATTG CAAGTGAAGG TATTAGTGCT TTACGAAAAG ATGTTTTGTC CAAATGCTAC
GGAGGCGATA TATCCAGAAA AAAGAAATTG TTGAAGAAAC AGGCAAAGGG GAAAAAACGA
ATGAAGTCTA TGGGGAAAGT AGATGTTCCC CAAGAGGCTT TTATGGCTGT TTTGAAATTA
AATAAAGATT AA
 
Protein sequence
MTNVPISRLR NFCIIAHIDH GKSTLADRLL QDTGTVSSRD MQEQFLDNMD LERERGITIK 
LQAARMNYKA DDGEEYVLNL IDTPGHVDFS YEVSRSLQAC EGALLVVDAS QGVEAQTLAN
VYLALENDLE IIPVLNKVDL PGADPEKIKN EIESIIGLDT SKAISCSAKT GVGIPEILQA
VVDRIPSPKD NTDQATKALI FDSYYDPYRG VIVYFRIMSG GISKKDKVLL MSSKKSYELD
EIGVMAPDQV KVNSLHAGEV GYLAASIKAV ADARVGDTIT LVDRPAQDAL PGYAEAKPMV
FCGLFPTDAD QYPDLRDALD KLQLSDAALK YEPETSSAMG FGFRCGFLGL LHMEIVQERL
EREYDLDLIV TAPSVIYKVK MIDGEIRMID NPATLPDPQK RETIEEPYVR MEIYAPNDYN
GTLMGLCQDR RGDFIDMKYI TTDRVTLIYE IPLAEVVTDF FDQMKSRTKG YASMEYHLIG
YRENDLVRLD VLINSERADP LTTIVHKDNA YGVGKGLVEK LKELIPKQQF KIPLQASIGS
RIIASEGISA LRKDVLSKCY GGDISRKKKL LKKQAKGKKR MKSMGKVDVP QEAFMAVLKL
NKD