Gene PMN2A_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1753 
Symbol 
ID3607163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp418079 
End bp419581 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content36% 
IMG OID637688644 
Productmalate:quinone oxidoreductase 
Protein accessionYP_292944 
Protein GI72383589 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAAGA TTTTGTTTAA TACCGGCACT CCAGATTCAG AAAATACTTA TGACGCAATA 
TTAGTAGGTG CAGGAATCAT GAGCTCTACT CTTGCAGTAC TTCTGCATGA GCTTGAGCCG
GATTTACGGT TGTTGGTTGT TGAAAAACTA TCTTCTGCTG GCTTGGAAAG TAGCTGCGCT
AAGAATAATG CTGGAACAGG ACATGCTGCT AACTGTGAGC TTAATTACAC TCCAATCCAA
GAGGATGGCC ATCTTAGTAC TACCAAAGCT TTTGAAATAA ATAAATCCTT TGAGCAAAGC
TTAGAATTTT GGGCATCTTT GGCAGAAAAA GGGAAATTGA TACCAAAAAC TTTTTTAAAT
AAGTTGCCAC ACATCAGCCT TGTCTTTGGA GATGAGGATA TTTCTTTGCT TAAAAAAAGG
TTTTCTAAAC TTAGTTCTCA TGCCGCTTTT GCCAAAATGG AATTCACTAT GGACCATGGT
GAATTACAAG ACTGGATTCC ATTGATTATG GATGGTAGGA AACAGAGTGA GAAGATTGCC
GCGACAAGAA TTAAAAGAGG TACTGATATT GATTTTGGCA ATTTAACTCG CTCATATATC
AATCAAATTG AAGGAGCAAA ATCTATTGAT ATTAATTACT CTACTAATGT TGAAAATCTT
CAACAAGATA GTGAAGGAGA TTGGTATTTA TCTTTAGAAG GAGCCAAAAA AAATAGAATT
GTTAGATCAA AGTTTGTTTT CCTAGGGGCA GGTGGAGGAG CCTTATCCCT TTTGCAAAAA
TCGAGAATTC CAGAAGGCTT GTTATATGCA GGATTCCCTG TTAGCGGCAA GTGGTTGATT
TGTGATGAGG AGAAATCAAC AAAAACACAT AATGCAAAGG TTTATGGAAA GGCAGCAGTT
GGAGCCCCGC CAATGTCAGT CCCGCACTTA GATACAAGAT GGATAGATAA AAAAAAATCT
CTTTTGTTTG GTCCTTTCGC AGGATTTAGT TCAAATTTTT TAAAATACGG ATCAAAGTTG
GATTTGTTTA GATCAATCAA AACAACTAAT CTTTTCTCAA TGTTGCAAGC AGGATTAGAC
AATATAGACC TAGGAAAATA CTTGTTAAAT CAATTAATAC AAACAAATGA GGATCGAATA
GATACTTTAA AAAGATTTCT TCCTCAGGTT TCACCTAATG ATTGGAAGCT TTCAACGGCA
GGACAGCGTG TTCAAATAAT TAAACAAACC TCTAAAGGTG GTGTTTTAAA AATGGGGACA
GAAGTGGTTA CTTCATCAGA TGGATCTTTA GCTGCTTTGC TTGGTGCTTC TCCGGGCGCA
AGCACAGCAG TAACAATCAT GATTGAAGTT CTAAACCGCT GCTGGCAGGA AAAAATGAAA
TCAAGTAAAT GGAAAAATAA AATGTTAGAG CTTTTCCCCA GTATTGGTAC AGATATTAAT
TCAGATCAAG AAGCTCTTTT GGCAATTCGA AAAAGAAACG ATTTCTTACT TAAATTAATT
TAA
 
Protein sequence
MIKILFNTGT PDSENTYDAI LVGAGIMSST LAVLLHELEP DLRLLVVEKL SSAGLESSCA 
KNNAGTGHAA NCELNYTPIQ EDGHLSTTKA FEINKSFEQS LEFWASLAEK GKLIPKTFLN
KLPHISLVFG DEDISLLKKR FSKLSSHAAF AKMEFTMDHG ELQDWIPLIM DGRKQSEKIA
ATRIKRGTDI DFGNLTRSYI NQIEGAKSID INYSTNVENL QQDSEGDWYL SLEGAKKNRI
VRSKFVFLGA GGGALSLLQK SRIPEGLLYA GFPVSGKWLI CDEEKSTKTH NAKVYGKAAV
GAPPMSVPHL DTRWIDKKKS LLFGPFAGFS SNFLKYGSKL DLFRSIKTTN LFSMLQAGLD
NIDLGKYLLN QLIQTNEDRI DTLKRFLPQV SPNDWKLSTA GQRVQIIKQT SKGGVLKMGT
EVVTSSDGSL AALLGASPGA STAVTIMIEV LNRCWQEKMK SSKWKNKMLE LFPSIGTDIN
SDQEALLAIR KRNDFLLKLI