Gene PMN2A_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1743 
Symbol 
ID3607153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp409920 
End bp411089 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content38% 
IMG OID637688634 
Productputative cystathionine gamma-synthase 
Protein accessionYP_292934 
Protein GI72383579 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATCAG TAAAAAGAGA GAAGGAATTC AGCACTGGAG TAAACACAAG AGTCATTCAT 
CACAAAGATA ATTTTTCTGA AGGAACTGGT TCAATAATGC CGCCAATCTT TCCAACCTCA
ACGTTCGTTC ATGGCAATGA GGGTGGCTTT GACTACACTC GTTCAGGAAA TCCAAATTTT
CGAATTCTTG AATCAGTTTT GTCTGATCTG GAAGAATGTA AGTTCGCAAG TGTATTTAGT
TCTGGAGTCG CTGCGATTAC AGCAATAGTC TCCACTCTTA AGGCTGGAGA CTTAATCCTT
TGTGAGGAGA ATCTTTATGG ATGTACGGTG AGATTATTTG AACAAGTTTT TAATCGTTTT
GGATTAAAAA CTCAATGGAT AGACTTTACT AAGCCTAATT TCCAAGAAGT CATTTCAAAT
CACAAACCCG CGATGATTTG GATCGAAAGT CCTACTAACC CACTCCTCAA AATTATTGAT
ATTGAAGGGA TTTGTCATTT CGCAAATAAA ATGAAAATAC CTGTTGTTGT AGACAATACT
TTTGCAACAC CTCTATTACA AAGACCTCTT CAACTTGGAG CGACCTTATC TTTAACTAGC
ACGACCAAGT TTATCAATGG TCACTCAGAT GCACTTGGAG GTGCCGTATG CACTGAGAGT
GCTATCTGGA GAGACAAGCT AAATTTCGCC CAGAAAGCTC TTGGATTAAA CCCTTCTCCC
TTTGATTGCT GGCTTATTAC ACGAGGAATA AAAACTCTTC CACTTCGTCT AGAAAGACAA
GTTAATAATG CATCTAAAAT AGCTAATCAA TTAGCCGATA ATCCAGCAAT AAAATATGTT
CGATATCCTT TCAGGAATGA TCATCCACAA TGTAAATTAG CAAAAAGACA AATGGCTATG
GGAGGAGCAA TTGTTACTGC CACTGTTAAC GCAACCCAAG CTCAAACCTA TTCATTTTGT
AAAAGTCTTC ATTACTTCAA AATGGCAGAA AGTCTCGGTG GAATTGAAAG TCTTGTTTGC
CATCCAGCCA CAATGACACA TGCTTCAGTG TCCAAGGAAA CAAAAATAAA AATTGGAATT
ACTGATTCAC TTATTCGATT TTCTATTGGA TGTGAGGACA TTGAAGACTT AAGTGCTGAT
TTGAATCAAG CCTTAGGAAC TATCTCTTGA
 
Protein sequence
MGSVKREKEF STGVNTRVIH HKDNFSEGTG SIMPPIFPTS TFVHGNEGGF DYTRSGNPNF 
RILESVLSDL EECKFASVFS SGVAAITAIV STLKAGDLIL CEENLYGCTV RLFEQVFNRF
GLKTQWIDFT KPNFQEVISN HKPAMIWIES PTNPLLKIID IEGICHFANK MKIPVVVDNT
FATPLLQRPL QLGATLSLTS TTKFINGHSD ALGGAVCTES AIWRDKLNFA QKALGLNPSP
FDCWLITRGI KTLPLRLERQ VNNASKIANQ LADNPAIKYV RYPFRNDHPQ CKLAKRQMAM
GGAIVTATVN ATQAQTYSFC KSLHYFKMAE SLGGIESLVC HPATMTHASV SKETKIKIGI
TDSLIRFSIG CEDIEDLSAD LNQALGTIS