Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1724 |
Symbol | |
ID | 3607134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 391910 |
End bp | 392902 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637688615 |
Product | dihydrouridine synthase TIM-barrel protein nifR3 |
Protein accession | YP_292915 |
Protein GI | 72383560 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGT TTTCTCCGAT TTGTTTGTCA GGCAATGGGA CACCTAGATC TCTAGAGTGT CTGGTTATTC AGTCCCCACT TGCAGGAGTA AGCGATCAAA TATTCAGGAA CTTTGTTCGT AGATGGTCTC CAAAAGCTTT ACTTTTCACC GAAATGGTAA ATGCTAAAAG TCTTGAATTA GGTCATGGTG AAGAGAAAGT AATTGAGCTT TCAGAAGAAA GTGGTCCAAT TGGTGTTCAA CTTTTTGACC ATAGGCCAGA TTCAATGGTA GATGCTGCCA TCAAAGCCGA ATCATCTGGT GCATTTCTTA TAGATATCAA TATGGGTTGC CCAGTAAAAA AAATTGCCAG GAAAGGAGGC GGAAGTGCTC TATTGAAAGA ACCAGAACTT GCACAATTAA TCGTCAAAAA GGTTTCAAAA GCCATATCTA TTCCAGTAAC AGTCAAAATA AGATTGGGGT GGTGTGAAAC CACAAGTGAT CCAGTATCTT TTGCTTTAGG TCTACAGGAG GCTGGGGCTC AACTCATAAC TGTTCATGGG CGAACAAGAA GGCAAGGATT TTCTGGCCAT GCAAACTGGA AAGCTATTGC AAAAATCAAA AAGTCATTAG ATATACCTGT CATCGCTAAT GGTGATATTA AAAACTCTCG AGATGCTATT GAGTGCCTAA AGATCACGAA TGCCGATGGG GTGATGATAG GAAGGGCAAG TATGGGAGCC CCATGGCTAG TTGGACAAAT TGATGAAGAA ATTAAGAACC AAACAACTTT TAAACCACCT GACGCAAAGA TGAAAGTGAG TTTATCTTTA GAGCACCTAA AATTACTTGT TTCAAAGAAA GGAAATCATG GGCTTTTGAT TGCTAGGAAA CATATGAATT GGACTTGTAG AGGTTTTGAA GGTGCGTCTA ATCTTCGCCA TAAATTAGTT AGAGCACGCA CTCCAAACGA CGCAATTAAA CTACTGGAAG ACGAACTGCT TAAATTCAAC TAA
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Protein sequence | MKEFSPICLS GNGTPRSLEC LVIQSPLAGV SDQIFRNFVR RWSPKALLFT EMVNAKSLEL GHGEEKVIEL SEESGPIGVQ LFDHRPDSMV DAAIKAESSG AFLIDINMGC PVKKIARKGG GSALLKEPEL AQLIVKKVSK AISIPVTVKI RLGWCETTSD PVSFALGLQE AGAQLITVHG RTRRQGFSGH ANWKAIAKIK KSLDIPVIAN GDIKNSRDAI ECLKITNADG VMIGRASMGA PWLVGQIDEE IKNQTTFKPP DAKMKVSLSL EHLKLLVSKK GNHGLLIARK HMNWTCRGFE GASNLRHKLV RARTPNDAIK LLEDELLKFN
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