Gene PMN2A_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1705 
Symbol 
ID3607113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp376092 
End bp376940 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content33% 
IMG OID637688594 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_292896 
Protein GI72383541 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAGAAT TACCTGAAGT TGAGACAGTT AGAAAAGGAC TTGAGAAACT TTTAAATGAT 
TTTTATATTG AAAGAATAGA AGTATTAAAA GAGCGATCAA TAGCAAGTAA TGGGGGATCA
AAAAGTTTCA TAGTTAGTGT TAAAAATAGT TATTTGGGTA GTTGGGAAAG AAGAGGTAAA
TATTTAATAG GATCCCTGCT TACAAAAGAA AAATTTAGCA AAGGTTTTTT AGTTGTTCAC
TTAAGAATGA CAGGCCAATT TAAATTACTT GAGAAAGAAG TTTTAGCATG CAAGCATACG
AGAGTGAGAT TTTTTGATGA GAGAGGGAGA GAACTCCGTT TTATAGATAT TAGGAATTTT
GGGCAAATGT GGCACGTGCC CTCGTCAAGA TCAATTCCGG AGATAGTATC TGGAATTAAA
AGATTAGGCC CAGAGCCATT TAGTGATGAT TTTAATAGTC ATTATTTAGA AGAATATTTG
AAGAAAAAAA CTCGCTCAAT TAAATCTGCT TTATTAGATC AAGAAACTGT TGCTGGAGTT
GGAAATATCT ATGCAGATGA AACATTATTT GATGCAGGGA TTAATCCAAA AAAAGAAAGT
AGAAATTTAA AAAGTACTGA ATTAAAAAGG CTTTGCAATA GTCTGGTCAA AATTTTAAAT
ATAAGTATTG GAGAGGGAGG CACAACTTTT AGTGACTTTA GAGATTTAGA GGGAATTAAT
GGAAATTATG GCGGACAAGC TTGGGTATAT AGACGAAGCG GTAAAAATTG TAAAAAATGT
GGAGAAAAGA TATTGCGAGA AAAGATCTGT GGAAGGAGCA CACACTGGTG TCCTAATTGC
CAAAAATAA
 
Protein sequence
MPELPEVETV RKGLEKLLND FYIERIEVLK ERSIASNGGS KSFIVSVKNS YLGSWERRGK 
YLIGSLLTKE KFSKGFLVVH LRMTGQFKLL EKEVLACKHT RVRFFDERGR ELRFIDIRNF
GQMWHVPSSR SIPEIVSGIK RLGPEPFSDD FNSHYLEEYL KKKTRSIKSA LLDQETVAGV
GNIYADETLF DAGINPKKES RNLKSTELKR LCNSLVKILN ISIGEGGTTF SDFRDLEGIN
GNYGGQAWVY RRSGKNCKKC GEKILREKIC GRSTHWCPNC QK