| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1681 |
|---|
| Symbol | |
|---|
| ID | 3607082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 347376 |
|---|
| End bp | 348422 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637688562 |
|---|
| Product | putative nucleotide sugar epimerase |
|---|
| Protein accession | YP_292872 |
|---|
| Protein GI | 72383517 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.174267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAA AGGCAAGTAA TGAGACGATT CTTGTAACAG GAGCCGCAGG TTTTATTGGC
GCGGCTTTAG TAAAAGCTCT GCTTAACTTG AATTTTAAAG TTATAGGTAT TGATAACTTA
AATGACTATT ATTCTACGTC CTTAAAGAGA TCCAGATTAA CTGAAATTGA AAAAGTTTCC
ACGGTAAATG GAGAATGGTT TTTTTATGAG ATTCCTATAG AAGATAATAA AGTATTGCAA
GACATAATTA ATAGATACAA TCCACAAGTT TTTGTTCATC TTGCCGCACA AGCGGGTGTT
CGTTATTCAA TAACCAACCC TGCTGCATAT ATACAAAGTA ATTTGGTAGG TTTTGCAAAT
GTATTGGAAG GATGTAGGCA GAATCAAATA CCTCATTTGA TTTATGCATC TAGCAGTTCT
GTTTATGGTG GCAATAAAAA TCTTCCTTTC TATGAAGAAC AAGCCGTAAA TCATCCAGTT
AGTTTGTATG CAGCCACTAA GAAATCTAAT GAATTAATGG CCCATACCTA TAGCCACTTA
TATGATTTAC CAACAACTGG ACTACGATTC TTTACCGTTT ATGGCCCATG GGGAAGACCC
GATATGGCTC CAATGATTTT TGCGAGATCA ATTTTAAATA ATGAGCCAAT CCAAGTATTT
AATTACGGTA AAATGCAAAG GGATTTTACT TACATCGATG ATGTAGTAGA GGGGATAATT
CGTTGTTGCT TCAAGAAAGC AAGTATTGAT GATGACTTTA ATCCTCTTGT TCCTAACCCT
TCAACTTCAT CAGCACCTTA TAGGATTTTT AATATAGGTA ATTCACGTCC AACTCAACTC
ACATATTTTA TAGAGTTATT AGAGAAGAAT TTGGGAAAGA AAGCTATAAA GAATTTTCAA
CCTATGCAGC CGGGAGATGT AGTTTCTACT GCTGCAAGAA TGGACTTGCT TAATTCGTGG
GTAGATTACA AACCCATAAC ATCCATAGAA AATGGTATTA AATTGTTCTC TGAATGGTAC
TTAGACTATT TTAAAAATAC TTTTTGA
|
|---|
| Protein sequence | MNSKASNETI LVTGAAGFIG AALVKALLNL NFKVIGIDNL NDYYSTSLKR SRLTEIEKVS
TVNGEWFFYE IPIEDNKVLQ DIINRYNPQV FVHLAAQAGV RYSITNPAAY IQSNLVGFAN
VLEGCRQNQI PHLIYASSSS VYGGNKNLPF YEEQAVNHPV SLYAATKKSN ELMAHTYSHL
YDLPTTGLRF FTVYGPWGRP DMAPMIFARS ILNNEPIQVF NYGKMQRDFT YIDDVVEGII
RCCFKKASID DDFNPLVPNP STSSAPYRIF NIGNSRPTQL TYFIELLEKN LGKKAIKNFQ
PMQPGDVVST AARMDLLNSW VDYKPITSIE NGIKLFSEWY LDYFKNTF
|
|---|
| |