Gene PMN2A_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1679 
Symbol 
ID3607080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp345501 
End bp346160 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content38% 
IMG OID637688560 
Producthypothetical protein 
Protein accessionYP_292870 
Protein GI72383515 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0162437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAG AAAAATTACA AAAGTACCTA ACTATTGCAT TTTTTGTAGG TGCTTTCATT 
TTACTTGTCT TCTTAATTCA GACGTATGGA ATTGAACCAT TAAGAAGTGC CGTGAAAGAA
ATGGGCATTT GGGCACCTCT GGGAATTCTG ATACTTCGAG GAATTAGCGT AATCCTTCCA
GCATTACCTA GCTCAGTTTA CTCACTTTTA GCCGGATCAT TACTTGGTTT CAAAACAGGT
TATCTAACTA TTTTTATATC TGACCTAATT TTTTGCCAGA TAGCATTTTT TATAGCCAGA
AATTTCGGCC GAGCTCCTGT TCGGAAATTA GTTGGAATAA AAGCCATGAA AAGAATTGAA
AGTTTTAACC AAAATCAACT AGAAGGCAAT TTCTTTCTAA TGACTGGACT ACTAATGACT
GGACTTTTTG ACTTTTTAAG CTATGCGCTA GGGATAGGGG GAACACGATG GAGGCTTTTC
ACGCCCGCTC TAATAATCAG TTTATTAATA AGTGATTCAA TTATTGTTGC TGTTGGAGCA
GGCGTCAGTC AGGGCGCTGG ACTAATGTTG GGAGGTGCCT TACTTGGAAT GTTTGCACTA
GCAACCATCA CTGGATTTAA TAAAAATAAA GTCTCCGAAA CGCAGAAAAA AAGCCAATGA
 
Protein sequence
MKKEKLQKYL TIAFFVGAFI LLVFLIQTYG IEPLRSAVKE MGIWAPLGIL ILRGISVILP 
ALPSSVYSLL AGSLLGFKTG YLTIFISDLI FCQIAFFIAR NFGRAPVRKL VGIKAMKRIE
SFNQNQLEGN FFLMTGLLMT GLFDFLSYAL GIGGTRWRLF TPALIISLLI SDSIIVAVGA
GVSQGAGLML GGALLGMFAL ATITGFNKNK VSETQKKSQ