Gene PMN2A_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1678 
Symbol 
ID3607079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp344605 
End bp345396 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content30% 
IMG OID637688559 
Productphycoerythrin class III gamma chain 
Protein accessionYP_292869 
Protein GI72383514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0080069 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGTA TCCCTTTTAA AGCGCTTAAA ATAGGAGCAG AAGCTATTAA TAAGGATCCA 
GTTAAGTTTA ACAAAAGTAG AGTATCTGGA AGTAAAAAAA CAATGTATGG ATTACATATA
AGAGGAGCAT CAATGCCAGG AGAAAAAGAA AAATTCACAG TCACATCTAA AACCAAACCT
AAGCAACTCG AAAACTTAAT TCATAACAAT GTTATGAGCA GTTACAGAAG GGATAAGATT
GAAAGTTATA AATACAAAAT ACTAAATAAG GAAAGTGCTG GAATAAATAT GCTTCAAATC
AATGAATTTG TTCCTAATGA TGATGATGCA TTACTTGTAG CAATCAATGC ATTATATAAA
CACATCTTTG GAAACTTATC ATTAATGCAA TCGGAGCGTC CAATTGATAT TGAAAGGAAG
CTAAGGAATG GTGATCTTAC AGTAAGAGAA TTTACAAGGA AAATTTGTAA ATCAACTATT
TATAGAAATT TCTACTTTGA TGGTATTAGC CAATATAAAT CTATCAAGTT AATATACAAG
CATATTCTTG GTAGGCCCAT CAAAAGTAAA GGCGAAGTAA CTCAAAGTTC AAATATTATA
AATAACCTAG GTTTTGAAGA GCATATTGAT TTTCTAATAG ATTCTAATGA ATATAATAAT
ATTTTTGGCG AAGATATTGT TCCCTACATG AGATCATGGA ATTCTCCAAC TGGTTTTAAA
ACAAAAAGTT TCCTAGAAAC TTCATACTTA ACAAAAGCTT TTGCGACAAG TGATATTTGT
AAAATTATTT AA
 
Protein sequence
MSSIPFKALK IGAEAINKDP VKFNKSRVSG SKKTMYGLHI RGASMPGEKE KFTVTSKTKP 
KQLENLIHNN VMSSYRRDKI ESYKYKILNK ESAGINMLQI NEFVPNDDDA LLVAINALYK
HIFGNLSLMQ SERPIDIERK LRNGDLTVRE FTRKICKSTI YRNFYFDGIS QYKSIKLIYK
HILGRPIKSK GEVTQSSNII NNLGFEEHID FLIDSNEYNN IFGEDIVPYM RSWNSPTGFK
TKSFLETSYL TKAFATSDIC KII