Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1678 |
Symbol | |
ID | 3607079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 344605 |
End bp | 345396 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637688559 |
Product | phycoerythrin class III gamma chain |
Protein accession | YP_292869 |
Protein GI | 72383514 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0080069 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAGTA TCCCTTTTAA AGCGCTTAAA ATAGGAGCAG AAGCTATTAA TAAGGATCCA GTTAAGTTTA ACAAAAGTAG AGTATCTGGA AGTAAAAAAA CAATGTATGG ATTACATATA AGAGGAGCAT CAATGCCAGG AGAAAAAGAA AAATTCACAG TCACATCTAA AACCAAACCT AAGCAACTCG AAAACTTAAT TCATAACAAT GTTATGAGCA GTTACAGAAG GGATAAGATT GAAAGTTATA AATACAAAAT ACTAAATAAG GAAAGTGCTG GAATAAATAT GCTTCAAATC AATGAATTTG TTCCTAATGA TGATGATGCA TTACTTGTAG CAATCAATGC ATTATATAAA CACATCTTTG GAAACTTATC ATTAATGCAA TCGGAGCGTC CAATTGATAT TGAAAGGAAG CTAAGGAATG GTGATCTTAC AGTAAGAGAA TTTACAAGGA AAATTTGTAA ATCAACTATT TATAGAAATT TCTACTTTGA TGGTATTAGC CAATATAAAT CTATCAAGTT AATATACAAG CATATTCTTG GTAGGCCCAT CAAAAGTAAA GGCGAAGTAA CTCAAAGTTC AAATATTATA AATAACCTAG GTTTTGAAGA GCATATTGAT TTTCTAATAG ATTCTAATGA ATATAATAAT ATTTTTGGCG AAGATATTGT TCCCTACATG AGATCATGGA ATTCTCCAAC TGGTTTTAAA ACAAAAAGTT TCCTAGAAAC TTCATACTTA ACAAAAGCTT TTGCGACAAG TGATATTTGT AAAATTATTT AA
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Protein sequence | MSSIPFKALK IGAEAINKDP VKFNKSRVSG SKKTMYGLHI RGASMPGEKE KFTVTSKTKP KQLENLIHNN VMSSYRRDKI ESYKYKILNK ESAGINMLQI NEFVPNDDDA LLVAINALYK HIFGNLSLMQ SERPIDIERK LRNGDLTVRE FTRKICKSTI YRNFYFDGIS QYKSIKLIYK HILGRPIKSK GEVTQSSNII NNLGFEEHID FLIDSNEYNN IFGEDIVPYM RSWNSPTGFK TKSFLETSYL TKAFATSDIC KII
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