Gene PMN2A_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1674 
Symbol 
ID3607075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp341050 
End bp341913 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content33% 
IMG OID637688555 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_292865 
Protein GI72383510 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.159661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAATT ACTTGAACAG TGAAATAACT ACTGAAGAAG AAAGTGAAAA GGCCGAGGGG 
GATAAACAAA ACATAGTGAG TAAGAAAAAA TCAAGTCAAA AAGACATCAA GCTATTAATC
AAAGGACTTA GTGATGAAAA TGGTTTGGTA AGAAGAAATT ATGCAATAGC ACTAGCCGAG
GTTGGTTCGG CAGCTTTACC TGAGTTAATC AAAGCTCTTC TGAATAGTAA AAACGTAATA
CAGAGAAGAG CGGCAGCTAA GACTTTAAAG TTAGTTAACG ATCCATCAGC TTTACCTCAT
TTAATAAAAG CACTTACCAG TGATTCAGAT TCTGTAGTGC AATTTTCAGC AGCTGGTGCA
ATTGCAATTT TTGGAGAGGC TGCTGTTAAT CATCTAATCA TTGTCTTGGA GAATCAAGAA
TATACAGAAA TGCAATATGG TCTTGCAGCA TGGTGTTTAG AATTTATTGG AGCTAAAGCC
TCTAATGCAA TAAAAAAAGC AGCTAAATCA AAAAACACCA ATGTAAAATC AGCTGCAATT
TCAGCACTTG AAGAACACAT TAGACAGTCC CAAGATCAGG AAGCAATTCA AATAGTAGAA
AGGGCTATTA ATGATACTGC TGAAAATGTT CAGATTGAAG CTATTAAATT AGTTGGTAAA
TTGTATAGAA TAGAATCTTT AATTCCTACC TTAATATTAA AATTAAAACA CAAAAATCCA
GATATTCGAA AATCTTCCAT ATTGTCATTA ATCCAACTTA ATATTAATGA AGCTATAAAT
CCACTCAGGG ACCTTCTTAA AATTGAGCAA GATAAAAATG TTATCGCAAT TATTAAATTA
GCTATAAAAA AAATCAACAA CTAA
 
Protein sequence
MDNYLNSEIT TEEESEKAEG DKQNIVSKKK SSQKDIKLLI KGLSDENGLV RRNYAIALAE 
VGSAALPELI KALLNSKNVI QRRAAAKTLK LVNDPSALPH LIKALTSDSD SVVQFSAAGA
IAIFGEAAVN HLIIVLENQE YTEMQYGLAA WCLEFIGAKA SNAIKKAAKS KNTNVKSAAI
SALEEHIRQS QDQEAIQIVE RAINDTAENV QIEAIKLVGK LYRIESLIPT LILKLKHKNP
DIRKSSILSL IQLNINEAIN PLRDLLKIEQ DKNVIAIIKL AIKKINN