Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1669 |
Symbol | |
ID | 3607070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 336311 |
End bp | 338728 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637688550 |
Product | ATP-dependent DNA helicase Rep |
Protein accession | YP_292860 |
Protein GI | 72383505 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAT CAAACAGTAT ATTTCTAAAT GGATTAAACG AGGCGCAGTC ACATGCAGTT GATCATTTTC ATGGTCCATT ATTAGTTGTA GCAGGAGCAG GAAGCGGAAA AACAAGAGCT CTTACTCATC GTATTGCGCA TTTAATTACT GAATACAAAG TTGATCCTAG TTCTATTCTT GCAGTTACTT TTACCAATAA AGCTGCAAGA GAGATGAAAG ATAGACTTGA ATTGCTTTTA GCAAAAAGGT TATCAAGTCT TACCCACGGG AAGCCTTGGA CTGCCTTACA AGTAGCAGAA CAAAGAGAAA TTCGTAATCG TATACATCGT GAAATCAGTC GTGAATTATG GATAGGTACT TTTCACGCTT TGTTTTCGAG ATTATTACGC TTTGACATCG ATAAATTCAA AGACCCTGAA GGATTGACAT GGACTAAACA GTTTTCAATA TATGACGAAA CAGATGCCCA AAGTCTTATC AAAGAAATAG TTACACAAGA TCTACAATTA GATCCAAAAA GATTTGAACC AAAAAAAGTA CGATGGGCAA TCAGTAATGC CAAAAATCAA TGCTTACTTC CTGATGATTT ATCAAATAAT CAAGAAGGTC AAAGAGGAAA ATTAGTTGCT GAAACTTATA GACTTTATAG AAAAGCTTTA GCTGCTAATA ATGCATTAGA TTTTGATGAT CTTCTATTAA TACCTGTTCA ATTACTACAA CAAAATGAAA AAATAAGGAC TTATTGGCAC AGTCGCTTCA AACATGTTTT AGTTGATGAA TATCAAGATA CTAATTGGAC ACAATACGAA TTAATTAAAC AGTTGGTGAC CAATGGTAAA GATCCATCTT CTTTTCAAGA TTGGAATAAT CGATCCGTTT TTGTTGTTGG CGATGCAGAT CAAAGTATTT ACAGCTTTAG AGCTGCGGAC TTTAGGATAC TAATGGGATT TCAAGAGGAC TTTGGAAAGA AAAGCCTAGA CAATAAATAT GATTCAACTC TTGTAAAACT AGAAGAAAAT TATCGATCTA CCTCTACCAT CCTCGAAGCA GCAAATTCAC TAATCTCCAA CAATAAAGAA AGAATAGATA AAGTTCTTAG AGCAACTAGA GGAGAAGGTG AGCCTATTAG ATTAACAAGG TGTGACGATG AGATAGCAGA GGCAGAAGCA GTTATTCATA GGCTAAGAAT TTTAGATGCC TCGAATCCAG AATTAAATTG GGGAGATATG GCTATTCTTT ATAGAACCAA TGCGCAATCA AGAGCAATTG AGGACTCATT GGTCCGCTGG AGTATTCCAT ACATTGTGGT TGGAGGATTA CGTTTTTATG ATCGAAGAGA AATTAAAGAT CTACTAGCTT ATTTAAGACT TTTAATTAAT CCATCTGACA GTGTCAGTCT TCTGAGAGTT TTAAACGTTC CTAAAAGAGG GATTGGCAAA ACAACAGTTC AAAGATTGAG TGATGCTGCT AGTCAATTAA AAATTCCTCT TTGGGAAGTT GTAAATGACC CCGAAGCTGT CAGATCTCTC GCAGGAAGAT CAGCCAAAGG TCTTTTAATT TTTAGTGAGC TTATTAATGA ATTACAAAGT CATCTTCTCT CTTCAAGCCC CGCCGAGTTG GTTCAATTAG TTTTAGAAAA AAGTGGCTAT TTAAGTGAAT TAATTGCAAC AGGAACAGAT GAGGCTGAAG AAAGAAGACG CAATCTTCAA GAATTAGTTA ATGCCGCGTT GCAATATCAG GAAGAAAGCG AAGATGCAAA TTTAGAAGGT TTTTTATCAA CTGCTGCTCT ATCAAGCGAT GCAGATAATA AAGACACTGC GTCAAATCGA GTCACATTAA TGACTCTTCA CAGCAGTAAA GGTTTGGAAT TTCCTGTTGT TTGTCTTGTG GGAATGGAGC AAGGCTTATT CCCAAGCTAT AGATCGCTTG ATGATCCATC TTCACTTGAG GAAGAAAGGC GACTTTGTTA CGTAGGACTT ACTAGAGCGA AAGAAAAACT ATTTCTCTTT CATGCATCTG AGAGAAGAAT GTGGGGAGGG ATGAGAGAAC CAGCTATCGC ATCTATATTC CTCTCCGAAA TACCAGAAGA ACTTGTTAAA GGCGATATCC CATTATCTGG TGGGGCTACA TTAAGAAGAG AAAAAAATCT AGACAGACTA ACTAGAATTG ATCGCCAAAG TAATAAAAAG TCCTTTCCTA GTGAAGCTGA AAATGCAGTA AGAAAAACAT ATTCTGGTCC TTCCCCAGGG AAGAGATGGT CAGTTAACGA TAGAGTTGAA CATTCTTCAT TTGGAGAAGG GATAATCACA CATGTTTTTG GTTCAGGAGA AAAAATCTCA CTGGCTATAA AATTCTCAGG AATGGGGCCA AAAATATTAG ACCCAAGACT AGCTCCATTG AAATTGATAG ATGAGTAA
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Protein sequence | MKQSNSIFLN GLNEAQSHAV DHFHGPLLVV AGAGSGKTRA LTHRIAHLIT EYKVDPSSIL AVTFTNKAAR EMKDRLELLL AKRLSSLTHG KPWTALQVAE QREIRNRIHR EISRELWIGT FHALFSRLLR FDIDKFKDPE GLTWTKQFSI YDETDAQSLI KEIVTQDLQL DPKRFEPKKV RWAISNAKNQ CLLPDDLSNN QEGQRGKLVA ETYRLYRKAL AANNALDFDD LLLIPVQLLQ QNEKIRTYWH SRFKHVLVDE YQDTNWTQYE LIKQLVTNGK DPSSFQDWNN RSVFVVGDAD QSIYSFRAAD FRILMGFQED FGKKSLDNKY DSTLVKLEEN YRSTSTILEA ANSLISNNKE RIDKVLRATR GEGEPIRLTR CDDEIAEAEA VIHRLRILDA SNPELNWGDM AILYRTNAQS RAIEDSLVRW SIPYIVVGGL RFYDRREIKD LLAYLRLLIN PSDSVSLLRV LNVPKRGIGK TTVQRLSDAA SQLKIPLWEV VNDPEAVRSL AGRSAKGLLI FSELINELQS HLLSSSPAEL VQLVLEKSGY LSELIATGTD EAEERRRNLQ ELVNAALQYQ EESEDANLEG FLSTAALSSD ADNKDTASNR VTLMTLHSSK GLEFPVVCLV GMEQGLFPSY RSLDDPSSLE EERRLCYVGL TRAKEKLFLF HASERRMWGG MREPAIASIF LSEIPEELVK GDIPLSGGAT LRREKNLDRL TRIDRQSNKK SFPSEAENAV RKTYSGPSPG KRWSVNDRVE HSSFGEGIIT HVFGSGEKIS LAIKFSGMGP KILDPRLAPL KLIDE
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