Gene PMN2A_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1659 
Symbol 
ID3607060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp328486 
End bp329235 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content38% 
IMG OID637688540 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_292850 
Protein GI72383495 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.094146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTGA ATCCCTTGAA AAAATCTCCC TCTTCTGAAG CTGTAAGAAA TCTTAGAGAA 
GCTTCCTGCG GTCCAGTTGG GACGCCGACA GTAACGAATG ATTTAAGCGA AAACATAATC
CTCACTAGCC TTGAAGATCT TCATAACTGG GCAAGACTAA GTAGTCTTTG GCCTCTTCTT
TATGGAACTG CTTGTTGTTT TATTGAATTT GCAGCTCTAA TTGGATCTAG ATTTGATTTT
GACAGATTTG GATTAGTACC TAGGAGTTCT CCTAGACAAG CAGATCTACT AATAGTGGCA
GGCACCGTCA CAATGAAAAT GGCACCTGCT CTTGTAAGGC TTTATGAGCA AATGCCAGAT
CCCAAATACG TAATAGCTAT GGGAGCTTGC ACTATTACTG GTGGAATGTT CAGCGCAGAC
TCCACCACGG CAGTCAGAGG TGTTGATAAG TTAATACCTG TTGATCTTTA CCTTCCTGGA
TGTCCTCCAA GACCTGAAGC AATATTTGAT GCTGTCATTA AATTAAGAAA AAAAGTTGCA
AACGAATCAA TCTCAGAAAG ATCAAAAATT ACCCAAACTC ATCGTTATTT AACTATCCCT
CATAAAATGA AGCGAGTCGA GTCAAAAGTA AATGGACAAT ACCTAAAGGC AAAAACTCAA
TTAATTGCTT TAAATCCTTC ACTATCTGAA GAGTTTGATC AATCTTTAAA AGAGGTTCAA
AAAATATCTG AAGAACTTTC AAGTAATTAA
 
Protein sequence
MELNPLKKSP SSEAVRNLRE ASCGPVGTPT VTNDLSENII LTSLEDLHNW ARLSSLWPLL 
YGTACCFIEF AALIGSRFDF DRFGLVPRSS PRQADLLIVA GTVTMKMAPA LVRLYEQMPD
PKYVIAMGAC TITGGMFSAD STTAVRGVDK LIPVDLYLPG CPPRPEAIFD AVIKLRKKVA
NESISERSKI TQTHRYLTIP HKMKRVESKV NGQYLKAKTQ LIALNPSLSE EFDQSLKEVQ
KISEELSSN