Gene PMN2A_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1640 
Symbol 
ID3607040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp308432 
End bp309700 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content35% 
IMG OID637688520 
Producthypothetical protein 
Protein accessionYP_292831 
Protein GI72383476 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.420806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT TACTTCTTTG TATATTGCTT GTAATACCAG CATTTTTCAA TGCAGGTCAA 
TTTGCCATAT TGCGACTTCG TTCAACTAAG GTTCAAAGAC TTGTAGAAGA TGGACTACCT
GGTTCCAATT CCATAATTCG TCTGCAGAAA AGGCTGAGAA GAACCCTTTT AATAGCTGAG
TTAGGAATAA CTATTTCATT AATTTCAATT GGTTGGATCT GCAAAAATTT CGCAAGTCAA
TGGTGGGGAA ATAATGCTTC AATTAACTAT TTGTTAGATC TAGGTCTTTT TATTACTGTT
GTACTTTTAG CTACTCTGAT ATCTGGTCTG CTCCCAAAAG CACTTGTTCT TAATCAACCA
GAGACTTCTG CCCTGAAATT ATCGCCTCTA ATTGAAGCAG CGATAAAATG GATGTCTCCA
TTCCTTTCTT TGCTTGAAGG ACTTGCTTTA TTAATTCTTA GATTATTTGG ACTTAATACT
CAATCAGAAA GTCTTACTAC AGCTGCATTC TCTGCAGGGG AATTAGAAAA ATTAATTGAA
ACTGGTGGCG TAACTGGATT AAAACCTGAT GAAAGAAACA TACTTGAAGG TGTTTTTGCT
TTAAGAGATA CACAAGTCAG AGAGGTAATG GTTCCTAGGT CAGGAATGGT TACTCTTCCA
AGAGAAGTTT CCTTCACTCA AATGATGGAA GAAGTTCATA AAACTCGTCA TGCCAGATAC
TTAGTAATTG ATGATTCACT TGATAATGTT CTTGGAGTTT TAGATTTAAG GCAACTTGCT
GATCCAATAG CTAAAGGAAA AATGCAAGCT AACTCCTCTT TGGAGCCTTA TATAAAGCCA
GTTGTTCGTG TTTTAGAAAC TTCTACTTTG GCCGAATTGC TACCCCTAAT AAAAAATGGG
AATCCACTAC TTTTGGTCGT TGATGAATAT GGAGGAACTG AAGGATTAAT AACATCAGCA
GACTTAACAG GTGAAATTGT TGGTGACGAG ATTCAATTCG ATAATAAAGA ATCTGAGCTA
AGATCTCTTG ATGACTTAAA AAAAATATGG CTTACTTCTG GTGAGATAGA AGTAATAGAA
CTAAATAGAG AGCTTAACTT AAAATTGCCA GAAGCTGATG ATCATTACAC TCTTGCTGGA
TTTGTTTTAG AAAAACTCCA AGAAATTCCC AGCTCAGGAG AAACGTTCAT TCATAATGAA
ATTGTATTTG AAATTATCTC CATGAAAGGT CCAAGAATAA ACAAAGTAAA AATAATCCTT
CCTAAGTAA
 
Protein sequence
MSLLLLCILL VIPAFFNAGQ FAILRLRSTK VQRLVEDGLP GSNSIIRLQK RLRRTLLIAE 
LGITISLISI GWICKNFASQ WWGNNASINY LLDLGLFITV VLLATLISGL LPKALVLNQP
ETSALKLSPL IEAAIKWMSP FLSLLEGLAL LILRLFGLNT QSESLTTAAF SAGELEKLIE
TGGVTGLKPD ERNILEGVFA LRDTQVREVM VPRSGMVTLP REVSFTQMME EVHKTRHARY
LVIDDSLDNV LGVLDLRQLA DPIAKGKMQA NSSLEPYIKP VVRVLETSTL AELLPLIKNG
NPLLLVVDEY GGTEGLITSA DLTGEIVGDE IQFDNKESEL RSLDDLKKIW LTSGEIEVIE
LNRELNLKLP EADDHYTLAG FVLEKLQEIP SSGETFIHNE IVFEIISMKG PRINKVKIIL
PK