Gene PMN2A_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1628 
Symbol 
ID3607028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp296563 
End bp297339 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content36% 
IMG OID637688508 
Productsugar fermentation stimulation protein A 
Protein accessionYP_292819 
Protein GI72383464 
COG category[R] General function prediction only 
COG ID[COG1489] DNA-binding protein, stimulates sugar fermentation 
TIGRFAM ID[TIGR00230] sugar fermentation stimulation protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAAA TTGGTGAAAC CATTATTAAG TTTCCTCCTC TTAAAGAGGG AATATTGATT 
AAGAGATATA AGAGGTTTTT GGCCGATATT GAGTTGGATG ATGGAGAGGT TGTTACAGCG
CATTGTGCAA ATACAGGACC AATGAAAGGG GTTTTGTGGC CTGGGCGGAG AGTCAGACTC
AAGTATTCTC CTTCACCTAA ACGTAAATTA GATTGGTCTT GGGAGCAAGC TGAGGTTCCT
AGTCACAATG AGAACAAGAA ATGCTGGGTT GGTATTAATA CATCTTTGCC TAATAAGTTG
ATTAAACATT TAATTGAAGC AAATTGTTTA GAGAGGCAAT TTGGTCAAAT TTCAAGCATT
AAGCCTGAAG TTGTTTATGG TTTAGAAAGA AAAAGTAGAA TTGATCTATT GCTTTATCCA
AGCATTCAGA ATGAAGATAG TAGAAAGATT TTTGTCGAGG TTAAAAATAC AACTTGGTGT
GAAGATTCTT TAGCATTGTT CCCAGATACA GTAACGACTA GAGGTCAAAA ACATTTAAAA
GAATTAATGA GTGTTTATCC AGATTCTCGA GCAGTGCTAA TTCCTTGTAT TAGTAGAAGC
GATATAGAAC TTTTTGCACC TGGTGAAATA GCAGATCCTG AGTATGGGAG GTTGTTTAGA
GAGGCATTAA CTAAGGGTGT TGAAGTGATT CCATGCGCAT TTGGTTTCTT TATAGATCAC
ATCACTTGGG AAGGTATTAG ACCTTTTCAG AAGTCGAGAG AAAATAAACA ATTTTAA
 
Protein sequence
MIEIGETIIK FPPLKEGILI KRYKRFLADI ELDDGEVVTA HCANTGPMKG VLWPGRRVRL 
KYSPSPKRKL DWSWEQAEVP SHNENKKCWV GINTSLPNKL IKHLIEANCL ERQFGQISSI
KPEVVYGLER KSRIDLLLYP SIQNEDSRKI FVEVKNTTWC EDSLALFPDT VTTRGQKHLK
ELMSVYPDSR AVLIPCISRS DIELFAPGEI ADPEYGRLFR EALTKGVEVI PCAFGFFIDH
ITWEGIRPFQ KSRENKQF