Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1628 |
Symbol | |
ID | 3607028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 296563 |
End bp | 297339 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637688508 |
Product | sugar fermentation stimulation protein A |
Protein accession | YP_292819 |
Protein GI | 72383464 |
COG category | [R] General function prediction only |
COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGAAA TTGGTGAAAC CATTATTAAG TTTCCTCCTC TTAAAGAGGG AATATTGATT AAGAGATATA AGAGGTTTTT GGCCGATATT GAGTTGGATG ATGGAGAGGT TGTTACAGCG CATTGTGCAA ATACAGGACC AATGAAAGGG GTTTTGTGGC CTGGGCGGAG AGTCAGACTC AAGTATTCTC CTTCACCTAA ACGTAAATTA GATTGGTCTT GGGAGCAAGC TGAGGTTCCT AGTCACAATG AGAACAAGAA ATGCTGGGTT GGTATTAATA CATCTTTGCC TAATAAGTTG ATTAAACATT TAATTGAAGC AAATTGTTTA GAGAGGCAAT TTGGTCAAAT TTCAAGCATT AAGCCTGAAG TTGTTTATGG TTTAGAAAGA AAAAGTAGAA TTGATCTATT GCTTTATCCA AGCATTCAGA ATGAAGATAG TAGAAAGATT TTTGTCGAGG TTAAAAATAC AACTTGGTGT GAAGATTCTT TAGCATTGTT CCCAGATACA GTAACGACTA GAGGTCAAAA ACATTTAAAA GAATTAATGA GTGTTTATCC AGATTCTCGA GCAGTGCTAA TTCCTTGTAT TAGTAGAAGC GATATAGAAC TTTTTGCACC TGGTGAAATA GCAGATCCTG AGTATGGGAG GTTGTTTAGA GAGGCATTAA CTAAGGGTGT TGAAGTGATT CCATGCGCAT TTGGTTTCTT TATAGATCAC ATCACTTGGG AAGGTATTAG ACCTTTTCAG AAGTCGAGAG AAAATAAACA ATTTTAA
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Protein sequence | MIEIGETIIK FPPLKEGILI KRYKRFLADI ELDDGEVVTA HCANTGPMKG VLWPGRRVRL KYSPSPKRKL DWSWEQAEVP SHNENKKCWV GINTSLPNKL IKHLIEANCL ERQFGQISSI KPEVVYGLER KSRIDLLLYP SIQNEDSRKI FVEVKNTTWC EDSLALFPDT VTTRGQKHLK ELMSVYPDSR AVLIPCISRS DIELFAPGEI ADPEYGRLFR EALTKGVEVI PCAFGFFIDH ITWEGIRPFQ KSRENKQF
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