Gene PMN2A_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1605 
SymbolileS 
ID3607004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp275997 
End bp278900 
Gene Length2904 bp 
Protein Length967 aa 
Translation table11 
GC content34% 
IMG OID637688484 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_292796 
Protein GI72383441 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0410688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAACA TCAAAAAAGA TTCTCAAAAG GATCGTCCCA CTTACAAAGA CACTCTCAAC 
CTTTTGCAGA CTAATTTTGG AATGAGGGCA AATGCAACTC TAAGAGAACC TGAGTTGCAA
GCTTTTTGGA GAGAAAAAAA TATAGATTTT GAATTAGGCT TAAATAATTC TGGAGAGACT
TTTACTTTGC ATGATGGCCC GCCATATGCA AATGGAACGC TTCATATGGG GCATGCTCTC
AACAAAGTAT TGAAGGACAT AATCAATAAA TTTCAAACAA TGAAAGGGAA AAAAGTTTGT
TATGTCCCTG GATGGGATTG CCATGGATTG CCTATTGAAT TGAAAGTTCT TCAAGCTATG
GATAAAAGTC AACGAGCTGA ATTAACACCT ATTAAGTTGA GAAAAAAAGC TGCTGCTTAT
GCAAAAAAGC AAGTTTCCCA ACAAATGGAT GGTTTTAAAA GATGGGGCGT ATGGGGTGAC
TGGGATCAAC CATATTTAAG TTTAGACAAA AAGTTTGAAG CCTCTCAAAT CAAGTTGTTT
GGTGAAATGG TCTTCAAAGG ATATATATAT CGAGGCCTAA AACCAGTTCA TTGGAGTCCA
AGTTCTCAAA CAGCTCTGGC CGAGGCGGAA CTAGAATATC CAACCGGTCA TACTAGCAAA
AGTATTTATG TAGGATTTAA AGTTAATCAA ATACCAAAAA GATTAACTCA AGAAATTTCT
AAGCAAGCTC CAGATCTAAT TAATTCTGAA GGGAAATTAA AAGAATTAAA ACTTGTCATT
TGGACTACTA CTCCTTGGAC AATTCCTGCA AATGAGGCCA TTTCTGTTAA CCAAAAATTA
GAATATGTAA TTGCACAAAG TTCTGATCGT TCATTGATAA TTATTGCTAA CGATCTTCTG
CAAGAAGTAT CTAAGAGTGT AGGAATTAAT TATGAAAAAA GAGTATTAAT CAAAGGATCA
ATCTTAGATG GAATTATATA TAAACATCCT TTATTTGATA AAATAAGTCC TGTTGTTTTA
GGAGGAGATT ATATTACAAC TGAATCAGGA ACTGGATTAG TACATACTGC TCCAGGTCAT
GGTGTTGATG ATTTTAATAC TGCTAAAAAA TATAATTTAT CAATTTCTTG CCCAGTTGAT
GAAAAAGGTT TTCTAACGAA AGAAGCAGGA AAATTTGAAG GTCTAAATGT ATTGAAAGAT
GCTAATAGTG TCATAATAAG TGATCTCATT AATGCTGGAT CTTTGCTTAA AGAAATTCCA
TATGAGCACA GGTATCCTTA TGATTGGAGA ACTAAAAAAC CAACTATTTT TAGAGCTACA
GAACAATGGT TTGCTTCCGT TGAAGGATTT AGAGATAAAG CCCTTTCTGC CATAGAAGAT
GTTATTTGGC TTCCTGAATC GGGAAAAAAT AGAATTAATT CCATGGTTAG AGAAAGAGGA
GATTGGTGTA TCTCCCGACA AAGGACCTGG GGAGTTCCAA TACCAGTATT TTATGAAAAG
AATGGACAAG AAATCTTGCT CAATAAAGAA ACTATTTCTC ATATAGCTGA TTTATTTTCT
GTTCATGGAG CAGATATTTG GTGGGAATAT GAAGTATCTG AGCTATTACC TCCTTCTTAT
TTAAATCAGG CAGATCGATG GCAAAAAGGT ACCGATACTA TGGATGTTTG GTTTGACTCC
GGCTCTAGTT GGTCTTCAGT TATTTCTAAG AAAGAAAATT TAAATTATCC AGCAGATTTA
TATTTGGAGG GATCTGATCA ACATCGGGGT TGGTTCCAGT CCTCTTTATT AACTTCGGTA
GCAGTGAATG AACATGCACC TTTTAAAAAG GTCCTTACAC ATGGTTTTGC ATTAGATGAG
AATGGTAGGA AAATGAGTAA ATCCTTAGGA AACATTATTG ATCCTTTAGT TATAATTAAT
GGTGGTTCAA ATAAGAAATT AGATCCTGCG TATGGAGCTG ATGTTTTGAG GTTATGGGTT
AGTTCTGTTG ATTACTCTGC AGATGTTCCT ATTGGATCAA ACATACTAAA GCAAATTTCT
GATGTTTATC GTAAGGTTCG AAATACTTCT AGGTATCTAT TAGGTAACCT CTATGATTTT
GATTATAAAA TTGATTCCAT TGATATTGCT AACCTACCAT TGTTAGATAA ATGGATGTTG
AATAGAACAG CTGAAGTAAT CGATGAAATA TCAGATGCAT ACAATAATTT TGAATTTTCG
AAATTTTTCC AAACAATTCA AAACTTTTGT GTTGTTGATC TATCTAATTT TTACTTAGAT
ATTGCAAAAG ATAGGTTGTA TGTGAGTTCT AAATCTGACT TTAGACGAAG AAGTTGTCAG
ACAGTTTTAT CCTTGGTAAT TGAAAAAATA TCTGGATTAA TTGCACCTGT TTTATGTCAT
ATGGCAGAAG ATATTTGGCA GAATATTCCA TATGACTTAG AGGAAGCCTC AGTATTTCAA
AGAGGATGGC CTAATGTACC TAAATCATGG AAAAATAGTA GTTTTAATTG TCATGTGACT
GAACTACGTA AACTCAGAGC AGTTATTAAT CGTATGTTGG AGAGTTGTAG AAATAATCAA
GCGTTAGGTT CTTCTTTGGA AGCATCAGTA AGGGTAGATA TATCTGATGA AAAAGTTAAA
GCTGCTATTG AATGGTTAGC TGAAAGCGAA TCTAATAATG TTGATGTATT AAGAGATTGG
TTCCTGGTTT CATCTTTGCA AATTGGTGGT GAGCCATGGG CTGAGGTTTT AGTTAGTGAG
GACAATGATT ATGCTTCAGT CGAGATTGCA AAAGCAAGGG GATTTAAGTG TGAAAGATGT
TGGCATTATG AAATAGAAAT GAGTAAGAAT CCTCAACACA CAAATATTTG CAAAAGGTGC
GAAAAAGTAG TCTTAGCTAT TTAA
 
Protein sequence
MNNIKKDSQK DRPTYKDTLN LLQTNFGMRA NATLREPELQ AFWREKNIDF ELGLNNSGET 
FTLHDGPPYA NGTLHMGHAL NKVLKDIINK FQTMKGKKVC YVPGWDCHGL PIELKVLQAM
DKSQRAELTP IKLRKKAAAY AKKQVSQQMD GFKRWGVWGD WDQPYLSLDK KFEASQIKLF
GEMVFKGYIY RGLKPVHWSP SSQTALAEAE LEYPTGHTSK SIYVGFKVNQ IPKRLTQEIS
KQAPDLINSE GKLKELKLVI WTTTPWTIPA NEAISVNQKL EYVIAQSSDR SLIIIANDLL
QEVSKSVGIN YEKRVLIKGS ILDGIIYKHP LFDKISPVVL GGDYITTESG TGLVHTAPGH
GVDDFNTAKK YNLSISCPVD EKGFLTKEAG KFEGLNVLKD ANSVIISDLI NAGSLLKEIP
YEHRYPYDWR TKKPTIFRAT EQWFASVEGF RDKALSAIED VIWLPESGKN RINSMVRERG
DWCISRQRTW GVPIPVFYEK NGQEILLNKE TISHIADLFS VHGADIWWEY EVSELLPPSY
LNQADRWQKG TDTMDVWFDS GSSWSSVISK KENLNYPADL YLEGSDQHRG WFQSSLLTSV
AVNEHAPFKK VLTHGFALDE NGRKMSKSLG NIIDPLVIIN GGSNKKLDPA YGADVLRLWV
SSVDYSADVP IGSNILKQIS DVYRKVRNTS RYLLGNLYDF DYKIDSIDIA NLPLLDKWML
NRTAEVIDEI SDAYNNFEFS KFFQTIQNFC VVDLSNFYLD IAKDRLYVSS KSDFRRRSCQ
TVLSLVIEKI SGLIAPVLCH MAEDIWQNIP YDLEEASVFQ RGWPNVPKSW KNSSFNCHVT
ELRKLRAVIN RMLESCRNNQ ALGSSLEASV RVDISDEKVK AAIEWLAESE SNNVDVLRDW
FLVSSLQIGG EPWAEVLVSE DNDYASVEIA KARGFKCERC WHYEIEMSKN PQHTNICKRC
EKVVLAI