Gene PMN2A_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1603 
Symbol 
ID3607001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp274060 
End bp275091 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content35% 
IMG OID637688481 
Productbeta-carotene hydroxylase 
Protein accessionYP_292794 
Protein GI72383439 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.100418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGT GCTTATCGAG GTCTGACAAA AACAAGGCAA CGAAAAAACT GAAGTCATTA 
CGCGACTGGC AAAATGAGAT CCAAGAATAT CTTGATCCGC CAAAGCCTTT AAACGTAACT
TTAGGTCTTT TCTTTGGTGG ATATTTTCTT GCAATAGTTA GTGTTTGGCA GTGGTATCAG
GGGAACTGGC CGTTACCAAT TTTAGTTGCA TTAGCTTTTT TAGCTCTACA TATGGAAGGC
ACTGTTATTC ATGACGCCTG CCACAATGCT GCCCACCCAA ATAAATGGAT CAATCAATTT
ATGGGACATG GGTCAGCGAT ATTACTAGGT TTTAGTTTCC CAGTTTTCAC AAGAGTTCAT
CTAGAGCATC ACAAATACGT TAACGACCCA AAAAACGATC CAGATCACAT AGTTAGCACC
TTTGGCCCTA TTTGGTTAAT TGCTCCAAGA TTTTTCTATC ATGAATATTT TTTCTTTGAG
CGAAAACTTT GGAGAAAGTT TGAACTAATG CAATGGGGAA TTGAAAGAGG AATATTTATT
TGCATAGTCA TTGCCGGAAT TAAATACAAT TTCATGAATG TTATTTATAA TTTATGGTTC
GGACCAGCAT TAATGGTTGG AGTCACTTTA GGAATATTTT TTGATTATCT ACCTCATAGA
CCTTTTCAGT CTAGAAATAG ATGGAAAAAT GCAAGAGTCT ATCCAAGTAA ATTAATGAAC
TTACTAATAA TGGGACAAAA TTATCATTTA GTTCATCATT TATGGCCCTC TATTCCATGG
TTTGAATATA AACCAGCTTA CGAAGCCACA AAACCACTTT TAGATCAAAA AGGTTCGCCT
CAAAGAATGG GGATTTTTGA AACTCAGAAA GATAGTCTAA ATTTTCTTTA TGATGTTTTA
CTTGGAATCA GAAGCCATAA AGAAAGAAGA AGTAAAATGA GACCAATAGC AAGAATATTA
CCGAAAAACA ATTGGAGGAG AAAATATATA AAATTAATTC ATAAAACTAG AATCAGAACA
GAAAGTAAAT GA
 
Protein sequence
MTQCLSRSDK NKATKKLKSL RDWQNEIQEY LDPPKPLNVT LGLFFGGYFL AIVSVWQWYQ 
GNWPLPILVA LAFLALHMEG TVIHDACHNA AHPNKWINQF MGHGSAILLG FSFPVFTRVH
LEHHKYVNDP KNDPDHIVST FGPIWLIAPR FFYHEYFFFE RKLWRKFELM QWGIERGIFI
CIVIAGIKYN FMNVIYNLWF GPALMVGVTL GIFFDYLPHR PFQSRNRWKN ARVYPSKLMN
LLIMGQNYHL VHHLWPSIPW FEYKPAYEAT KPLLDQKGSP QRMGIFETQK DSLNFLYDVL
LGIRSHKERR SKMRPIARIL PKNNWRRKYI KLIHKTRIRT ESK