Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1595 |
Symbol | |
ID | 3606993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 265871 |
End bp | 267718 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637688473 |
Product | cell division protein FtsH2 |
Protein accession | YP_292786 |
Protein GI | 72383431 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.169685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACAAAC GCTGGAGAAA CATTGGTCTT TATGTCCTAA TTGTTGTAGT TGTGATTTTT GTTGGAAGTG CTTTTTTCGA TAAGCCAAGC CCGACAAAGT CATCTAGAAC ACTCAGATAC AGTGACTTCA TAGAAGCTGT TCAAGAGAAG CAAATAAGCA GGGTTCTTAT TTCTCCAGAT AAAGGAACTG CTCAAATTGT TGAAAGTGAT GGGAACAGGG CTTTAGTCAA TTTGGCTCCT GATCAACAAT TACTCCAATT ACTTACTGAT AATGACGTCG ATATTGCCGT ACAACCAACT ACTCAAGCGA ATCCTTTACA GCAAGCTGCT ACTAGCTTAA TTTTTCCAAT TCTTTTATTA GGAGGTCTAT TTTTTCTATT TAGAAGAGCA GGTTCTGGTG GTGGTGGAAA CCCAGCAATG AATTTTGGGA AGAGTAAAGC AAGACTTCAA ATGGAGCCTG AAACAAAAGT TACTTTTGGA GATGTTGCTG GAATTGAAGG TGCAAAGCTT GAACTTACTG AAGTAGTTGA TTTCTTAAAA AATCCTGATC GCTTCACAGC TGTAGGAGCA AAAATTCCTA AAGGTGTTTT ATTGGTTGGA CCTCCAGGGA CAGGTAAAAC TTTGCTTGCA AAGGCAGTTG CAGGTGAAGC TTCAGTTCCA TTCTTTTCCA TATCTGGATC TGAGTTTGTA GAGATGTTTG TTGGCGTTGG TGCGAGCAGA GTCAGAGACC TTTTTGAACA AGCTAAAAAG AATGCTCCTT GTATAGTTTT TATTGATGAA ATAGATGCTG TTGGTCGTCA GCGTGGCGCA GGACTTGGAG GAGGTAATGA TGAAAGAGAG CAAACGCTAA ATCAACTGCT AACTGAAATG GATGGATTTG AGGGAAACTC AGGAATAATT ATTGTTGCAG CTACAAATAG ACCTGATGTG CTCGACTCAG CACTCATGAG ACCAGGAAGA TTTGACAGGC AAGTAACTGT TGACAGACCT GATTACTCAG GGAGATTGCA AATACTGAAT GTTCATGCAA AAAGTAAAAC ACTTTCAAAG GCAGTTGACC TTGATCAAGT AGCGAGAAGG ACCCCTGGAT TTACTGGGGC AGATTTAGCA AATCTATTAA ATGAAGCTGC CATATTGGCT GCCAGAAGAG AATTAACAGA AGTCAGTAAC GATGAGGTCA GTGATGCAAT CGAGAGAATA ATGGTAGGTC CTGAGAAGAA AGACTCAGTG ATTAGTGAAA AACGTAAAAA ATTAGTTGCT TATCATGAAG CTGGCCATGC AGTAGTTGGT GCTGTGATGC CTGATTATGA CCCTGTGCAA AAGATCTCAA TCATTCCAAG AGGTGGAGCT GGAGGATTAA CTTTTTTCAC GCCAAGTGAA GAAAGAATGG AATCTGGACT TTATTCAAGG TCTTACCTAC AAAATCAAAT GGCTGTTGCT CTTGGAGGAA GAGTTGCAGA GGAAATCATT TATGGAGAAG ACGAAGTAAC CACAGGAGCA TCAAATGATC TAAAGCAAGT AGCTTCAGTT GCACGGCAAA TGATTACCAA ATTTGGTATG AGTGACAAGT TGGGACCAGT AGCTTTAGGA CGTTCGCAGG GTGGGATGTT CCTTGGTAGA GACATCTCTG CAGAAAGAGA TTTTTCTGAA GATACAGCAG CAACAATTGA TTCAGAAGTT TCAGTTCTTG TTGAGATTGC ATACGAAAGA GCTAAAAAGG CTTTAAACGA CAATCGTCAA GTACTTGAGG AGTTAACAGC AATGCTTATG GAAACTGAGA CAGTTGATTC TCTAGAGTTC CAGGATTTGT TAATTCGCCA TGAAGTTAAA GTTGCTGAAT ATGCTTAG
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Protein sequence | MNKRWRNIGL YVLIVVVVIF VGSAFFDKPS PTKSSRTLRY SDFIEAVQEK QISRVLISPD KGTAQIVESD GNRALVNLAP DQQLLQLLTD NDVDIAVQPT TQANPLQQAA TSLIFPILLL GGLFFLFRRA GSGGGGNPAM NFGKSKARLQ MEPETKVTFG DVAGIEGAKL ELTEVVDFLK NPDRFTAVGA KIPKGVLLVG PPGTGKTLLA KAVAGEASVP FFSISGSEFV EMFVGVGASR VRDLFEQAKK NAPCIVFIDE IDAVGRQRGA GLGGGNDERE QTLNQLLTEM DGFEGNSGII IVAATNRPDV LDSALMRPGR FDRQVTVDRP DYSGRLQILN VHAKSKTLSK AVDLDQVARR TPGFTGADLA NLLNEAAILA ARRELTEVSN DEVSDAIERI MVGPEKKDSV ISEKRKKLVA YHEAGHAVVG AVMPDYDPVQ KISIIPRGGA GGLTFFTPSE ERMESGLYSR SYLQNQMAVA LGGRVAEEII YGEDEVTTGA SNDLKQVASV ARQMITKFGM SDKLGPVALG RSQGGMFLGR DISAERDFSE DTAATIDSEV SVLVEIAYER AKKALNDNRQ VLEELTAMLM ETETVDSLEF QDLLIRHEVK VAEYA
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