| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1569 |
|---|
| Symbol | rplJ |
|---|
| ID | 3606967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 239536 |
|---|
| End bp | 240063 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637688447 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_292760 |
|---|
| Protein GI | 72383405 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCA CGCTGGAAAG CAAAAAGCAG ATCGTCAAAA AAATAGAGGA TCTATTAGAC
AATTCCGAAA TGGCATTAGT TCTTGATTAC AAGGGCTTAT CCACAAAAGA GATGTCTGAC
TTGCGCTCAA GATTGCAACA AAGCGATGGT GTATGCAAGG TCACTAAAAA CACCTTGATG
CGTCAAGCCA TAAAAGGAAA AAATTCCTGG ACTGGTTTGG ATTCATTGCT TACTGGAACC
AACGCCTTTG TTTTAATCAA AGGAGATGTT GGCAGTGCTG TTAAAGCTGT ACAAGCATTT
CAAAAGGAAA CTCAAAAGTC TGAGACTAAA GGAGGTCTTT TCGAAGGCAA ACTTTTATCT
CAAGATGAAA TCAAAGCGAT TGCAAAACTT CCTAGCAAGG AAGCACTTAT GGGACAAATT
GCTGGTGCAT TGAATTCCAT AACAAGCAAA ATCGCTATTG GTATCAACGA GGTTCCTTCT
GGACTTGCAA GGTCTCTTAA ACAACATTCT GAAAACGGCG AGAGCTGA
|
|---|
| Protein sequence | MGRTLESKKQ IVKKIEDLLD NSEMALVLDY KGLSTKEMSD LRSRLQQSDG VCKVTKNTLM
RQAIKGKNSW TGLDSLLTGT NAFVLIKGDV GSAVKAVQAF QKETQKSETK GGLFEGKLLS
QDEIKAIAKL PSKEALMGQI AGALNSITSK IAIGINEVPS GLARSLKQHS ENGES
|
|---|
| |