Gene PMN2A_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1567 
Symbol 
ID3606965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp238535 
End bp239020 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content39% 
IMG OID637688445 
Productribonuclease HI 
Protein accessionYP_292758 
Protein GI72383403 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAG AAGAAAAATT AGCGATTGCT GCAGCAACCG ATGGTGCATG CAGTGGTAAT 
CCTGGTCCGG GTGGCTGGGG AGCATTAATC AGATTCCAGG ATGGAAGCGA GATTGAATTC
GGTGGGAACT CCCCCGAGAC AACGAATAAT CGCATGGAAT TACAGGCTGC ATTATTTATT
CTAGAAAAAT TAAAAAACAT AAAATTTGCC CCTTCACTAA CTATTAAAAC TGATAGCAAA
TATTTAATTG ATGGAATGGA CAAATGGATG CCAAATTGGA AAAAGAAAGG CTGGAAAACT
GCCTCTGGCA AACCAGTTCT CAATCAAGAT TTGTGGAAAG CTCTTGACCA TCCTGAACTA
CCAAAAATCA AACTTCAATA TGTCAAAGGT CATAGCGGAG AAAAGGATAA TGACAGAGTC
GATGCAATTG CGGTAGCTTT TTCTAAAGGT AGGAAAATAC AACTTAAAGA TTTTGCCAAC
AACTAA
 
Protein sequence
MSKEEKLAIA AATDGACSGN PGPGGWGALI RFQDGSEIEF GGNSPETTNN RMELQAALFI 
LEKLKNIKFA PSLTIKTDSK YLIDGMDKWM PNWKKKGWKT ASGKPVLNQD LWKALDHPEL
PKIKLQYVKG HSGEKDNDRV DAIAVAFSKG RKIQLKDFAN N