Gene PMN2A_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1566 
Symbol 
ID3606964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp237391 
End bp238548 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content37% 
IMG OID637688444 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_292757 
Protein GI72383402 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAACAA CTAAAAAAAA CGACTTATAC AACATTCTCC TCGGTCAGCT TCTATCTCAA 
GACGAGGGTA TTGATGCAGA AATACTTACT AATTCTGCCC TTAATGCAAT TAAATTCGCA 
TCATTAAATA GAAACTTTCC ATTAATTTCT AATATCCTTT TAAAAGCATC AAGTGATTTT 
CAAAGAAACA ATTCAAGCTT AAATCAAATT GTTTTTGGCT CTCACTTTAA AAATCCTGTG 
GGACTTGCTG CTGGATTTGA CAAGAATGGC GTAGGAGCAG GCCTTTGGAA TTATTTTGGA 
TTTGGTTTCG CCGAATTGGG AACTATTACT TGGCATGCCC AAGAAGGCAA TCCAAAACCT 
AGACTTTTCA GAATTGCAAA AGAGAAAGCT GCGCTGAATC GAATGGGATT CAATAACCAA 
GGAGCAGAGA ATTTTTTAAA AACAATAGAA AAACAGAAAA TCCTTGCACC AGGGAATAGA 
CCTTGTGTCC TAGGAATAAA TTTAGGAAAG TCAAAAATCA CTCCACTCGA TGAAGCCCAT 
AAAGACTATT CTTTATCTCT AAAACTATTG GCTCCTTTAT CAGACTATGC AGTAATTAAT 
GTTAGTTCAC CTAATACCCC AGGCCTTCGT TCATTACAAG GAACAAAACA AATAAAAAAA 
TTAATAAGCA CGCTTAAAGA TTTACCCAAT TGTCCTCCTT TGCTTGTAAA AATTGCCCCA 
GATCTTTCCA ATGAAGCAAT TGATGAAATT GCAAGAGTTG CGATGGAAAA CGGCATCGAT 
GGAATTATTG CAATCAATAC AAGCTTAGAT CGATTTGATT TAAAAAATCT GAAAATCAAA 
ACTGGCAATA CTCTAGGACA AGAAAATGGT GGATTAAGTG GTCTACCCTT ACAAAAAAGA 
GGACTAGATG TTATTCGGAG ACTAAGAAGA AGTACTGATA ATGATTTGCC TCTGATTGGT 
GTGGGTGGAA TTCATTCAGC AAGAGCGGCA TGGGAAAGAA TTACAGCTGG TGCATCACTG 
GTTCAGATTT ATACTGGGTG GATATTTGAG GGACCAAATT TAGTTCCAGA CATACTAGAT 
GGATTAATCC AGCAAATGGA AAAACATGGA TTCCGAAATA TTAAAGAGGC CATCGGTTCC 
GAAGAACCCT GGAAGTAA
 
Protein sequence
MPTTKKNDLY NILLGQLLSQ DEGIDAEILT NSALNAIKFA SLNRNFPLIS NILLKASSDF 
QRNNSSLNQI VFGSHFKNPV GLAAGFDKNG VGAGLWNYFG FGFAELGTIT WHAQEGNPKP 
RLFRIAKEKA ALNRMGFNNQ GAENFLKTIE KQKILAPGNR PCVLGINLGK SKITPLDEAH 
KDYSLSLKLL APLSDYAVIN VSSPNTPGLR SLQGTKQIKK LISTLKDLPN CPPLLVKIAP 
DLSNEAIDEI ARVAMENGID GIIAINTSLD RFDLKNLKIK TGNTLGQENG GLSGLPLQKR 
GLDVIRRLRR STDNDLPLIG VGGIHSARAA WERITAGASL VQIYTGWIFE GPNLVPDILD 
GLIQQMEKHG FRNIKEAIGS EEPWK