| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1560 |
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| Symbol | |
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| ID | 3606958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | - |
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| Start bp | 230831 |
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| End bp | 231811 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637688438 |
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| Product | putative pseudouridylate synthase specific to ribosomal large subunit |
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| Protein accession | YP_292751 |
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| Protein GI | 72383396 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAG AAATCAAGCA TGGATTTGGG CAGGGCCCAG GTGAATTATT TGAGGGCGAA
TATAAGAAAC CTTTGCCAAT GCGGCTTGAT AGATGGCTGG TAAGTCAACG AGCTGAACAA
AGTAGAGCTC ATATTCAGAA ATTCATTGAA GCGGGGTTCG CAAGAGTAAA TGGTAAAACT
GGAAAAGCAA AAACTCCCGT TAGGCCAGGT GACATAATTC AACTTTGGGT TCCACCACCT
GAGCCTCTTC CTTACTTAAA GCCAGAAGAA ATTGATTTAG ATATTTTGTA TGAAGATGAT
CATTTAATAG TCATTAACAA AACAGCAGGA ATAGCGGTTC ATCCTGCACC AGGTAATAAA
TCAGGAACAT TAGTTAATGG ATTAATCCAT CATTGCCCAG ACTTACCTGG CATTGGAGGT
AAATTAAGAC CTGGAATCGT TCATCGCTTA GATAAAGACA CAACTGGATG CATTGTGGTA
GCAAAGACTC AAGAAGCCTT AGTTAAACTG CAAATTCAAA TACAAAAGAG AGTAGCCTCA
AGAAATTATA TTGCTGTTGT TCATGGAGCT ATTAAAAACA ATGAAGGCAT GATTGTCGGG
AGTATTGGCC GACATCCAAA AGATAGAAAA AAATATGCTG TAGTTGATGA GGAATCTGGT
AGATATGCTT GTACACATTG GAAATTAATT AAAAATCTAG GAAATTTTTC TCTTCTTAAA
TTCAAGCTTG ATACAGGTAG AACGCATCAA ATTCGTGTCC ATAGCGCACA CATCGGTCAT
CCCATTATTG GAGACCAAAC TTATAGTAGA TGTAAAAAAT TACCTATTAA ACTTGGTGGC
CAAGCATTAC ATGCAATTGA ATTGGGTTTA ATACACCCAA TAACATTAGA AAAAATGAAA
TTCACAGCTC CATTGCCTGA AGACTTTGAA CGACTTTTAA AAGTTTTACA ACCTAAAAAT
AATATTAATC CGGAAGTCTA G
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| Protein sequence | MDKEIKHGFG QGPGELFEGE YKKPLPMRLD RWLVSQRAEQ SRAHIQKFIE AGFARVNGKT
GKAKTPVRPG DIIQLWVPPP EPLPYLKPEE IDLDILYEDD HLIVINKTAG IAVHPAPGNK
SGTLVNGLIH HCPDLPGIGG KLRPGIVHRL DKDTTGCIVV AKTQEALVKL QIQIQKRVAS
RNYIAVVHGA IKNNEGMIVG SIGRHPKDRK KYAVVDEESG RYACTHWKLI KNLGNFSLLK
FKLDTGRTHQ IRVHSAHIGH PIIGDQTYSR CKKLPIKLGG QALHAIELGL IHPITLEKMK
FTAPLPEDFE RLLKVLQPKN NINPEV
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