Gene PMN2A_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1553 
Symbol 
ID3606951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp220710 
End bp221825 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content36% 
IMG OID637688431 
Producthistidinol phosphate aminotransferase 
Protein accessionYP_292744 
Protein GI72383389 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA TAGAGAGTTC ATTTATTGAT CTACCAAACC CCAGGAAAGA TATCGAGGAT 
TTACAGCCAT ATTCAGCACC ACTGGAAGGA AGACGAAATT TACTAAGACT AGACTTTAAT
GAAAACACTA TTGGGCCAAG CCCACTAGTA ATTAAATCTC TCAGAGAAAT AAGCAGAGAT
GAAATCTCTG CTTATCCTGA ATACTCAGGT TTAAAAGAAA AAGTAGTAGA GAGTCTCATC
AAAAAAAATT CAAATGTGAA TATCAACTCA TCTGAAGTTG GTATTTTTAA TGGAGTAGAT
GCAGCAATAA ATGCTATTTT TCACGCATAT GGCAACTTTG ATGATCTAAT GCTAACAACA
TTGCCTACTT TTGGATATTA TACTCCTTGC GCACAAATGC GAGGAATGCA AATCAAAGCA
ATACCTTATG AGGGAGAGGG ATTTCAATAT CCATTTGATA GTATTTGCGA ATTCCTCACG
CAAAATAATC CGAAAATTTT ACTTATCTGC AACCCCAATA ACCCCACTGG AACAAGGTTA
AGCCCAGAAA GAATTATAGA AATCAGCAAA CTTTCATCTA AAACACTCGT TGTTGTGGAT
GAACTTTACG AGGCGTTTAC AGGTGATAGT GTTCTACCAT TTTTAAATTT CCAAACAACA
CCTAATCTTG TTGTATTAAG ATCGCTTTCT AAAACTGCTG GTTTAGCAAG TTTAAGAATT
GGATTTGCTA TTGGTCATTC TAAAGTAATT AATATAGTTA ATAGAGTTAC TGGTCCTTAT
GACGTCAACA GCTTTGCCGT GATCGCTGCT TTTGCAGCAC TTAATGATCA ATCATATATT
GACTCGTATG TGCAGGAAGT GCTTGAGGCT CGTAATTGGA TCAAGGATCA ATTCGAGAAG
CACCACGTCA AGCATCATAT TGACGGAGGA AACTATTTTC TACTTTGGCC AAAATCAAAA
CCACAACTAG TTGAGCAAAA GCTAAAATCA TCTGGAATTC TAATTAGAAA TATGGATAAG
AAAAAAAATT TAAAAGGTTC TATCAGAGTG AGCATAGGAA CCATTGACCA AATGAAAAGA
TTCTGGTCAG CCTTCAGGAT TGTCGATGAA GTATAG
 
Protein sequence
MENIESSFID LPNPRKDIED LQPYSAPLEG RRNLLRLDFN ENTIGPSPLV IKSLREISRD 
EISAYPEYSG LKEKVVESLI KKNSNVNINS SEVGIFNGVD AAINAIFHAY GNFDDLMLTT
LPTFGYYTPC AQMRGMQIKA IPYEGEGFQY PFDSICEFLT QNNPKILLIC NPNNPTGTRL
SPERIIEISK LSSKTLVVVD ELYEAFTGDS VLPFLNFQTT PNLVVLRSLS KTAGLASLRI
GFAIGHSKVI NIVNRVTGPY DVNSFAVIAA FAALNDQSYI DSYVQEVLEA RNWIKDQFEK
HHVKHHIDGG NYFLLWPKSK PQLVEQKLKS SGILIRNMDK KKNLKGSIRV SIGTIDQMKR
FWSAFRIVDE V