Gene PMN2A_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1543 
Symbol 
ID3606941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp213029 
End bp214000 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content35% 
IMG OID637688421 
ProductO-succinylbenzoate-CoA synthase 
Protein accessionYP_292734 
Protein GI72383379 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID[TIGR01927] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.324734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA TAATTAATAT CAAGCCATTT TCATTTGATT TAACACGAAA GTTAATAACA 
TCTAAAGGAA TTATTCATAA AAAGATAGGT TTATTGTTGC AAATAAAAGA CTCAAATGGA
AATTACGGAT GGGGGGAAGT TTCACCTATT GAGAAAAAGG AATTAGAAAA AAGTATAGAA
AGTCTTGATT TTATTGGGAA ACAAACTACA AAAGATTCAA TAGAAAATTA TTTATTTGAA
TTGCCAGGCG CACTTGCTTT CGGATTAGGG TCCTGCTTAG CCGATTTAGA AAGTCTCACT
CATAGGAAGT TAAATCTTGA AGGTTTTGAC GACGCAAAAT CAGCTTATCT TTTACCTACA
GATATTGATC CATTAGAGTC AATACGTAAA TATGTAGATG AATCAAATGA GAAGAAAAGT
TCTTGTACAA TAAAATGGAA AGTATCTCAC CTAGAAAATA ACTTTAAGGA AGAAAAAACA
TTACAAAAAA TCTTAGACAT TTTACCAAAT AATTTTAAAC TTAGAATTGA TCCAAATGGA
GGTTGGAGTC GCCAAAAAGC ACAAGAATGG ATTAACGAAC TCAAAAACGA ACCTCGTTTG
GAATGGATTG AACAGCCACT CCCATCAAAA GATATTGAAG GTTTATTTTC ATTGGCCACT
CAAATTCCAA TCGCACTAGA TGAATCTTTG GTTGAATTTC CATATTTACG AAAAACATGG
AAAAGTTGGC AAATACGTCG CCCTGCATTA GATGGTGATC CGAGATTACT GTTAAAAGAA
ATAGAACAAG AAGATAGTCA AACAGTCATA AGCACAGCTT TTGAAACTGG TATTGGGAGA
AGGTGGGTTA ATCACCTCGC TGCCAGACAA GTCAAAGGGG GAAATCCTCG TGCACCTGGA
CTTGCACCTG GATGGTGCCC AAAAGGCCCA CTCTTCAACA ACAATCCGAA ATTAGTCTGG
GAAGCCGTAT GA
 
Protein sequence
MKLIINIKPF SFDLTRKLIT SKGIIHKKIG LLLQIKDSNG NYGWGEVSPI EKKELEKSIE 
SLDFIGKQTT KDSIENYLFE LPGALAFGLG SCLADLESLT HRKLNLEGFD DAKSAYLLPT
DIDPLESIRK YVDESNEKKS SCTIKWKVSH LENNFKEEKT LQKILDILPN NFKLRIDPNG
GWSRQKAQEW INELKNEPRL EWIEQPLPSK DIEGLFSLAT QIPIALDESL VEFPYLRKTW
KSWQIRRPAL DGDPRLLLKE IEQEDSQTVI STAFETGIGR RWVNHLAARQ VKGGNPRAPG
LAPGWCPKGP LFNNNPKLVW EAV