Gene PMN2A_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1538 
Symbol 
ID3606936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp208047 
End bp209195 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content38% 
IMG OID637688416 
ProductNifS-like aminotransferase class-V 
Protein accessionYP_292729 
Protein GI72383374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATA ATCACCTAAT TTTTGATTTT CAGTCTTCAA CACCATGTTG TACGAAGGTT 
GTTGAGGAGA TGGCTCCTTA TTGGAATGAG TTGTGGGGTA ATCCCTCTAA TACTAATAAT
CGATCCGGTG TTTTTGCTTC AGCTGCAGTT GAAGTATCTC GTGAAAAAAT AGCTTCATAT
TTGAATATAA ATCCGAAAAG ATTAATTTTC ACGAGTGGGG CAACAGAAGC GAATAATTTG
GGTTTAGTTG GACATGCAAG AGCTAAAGCA CAACTGATTG GAAAACCCGG ACACATAATT
ACTGTTTCAA CTGAACATCA TGCAGTCCTT GATCCGCTTA GGCAGCTTCA AAAAGAAGGG
TTTCGCTTGA CAGAATTGCA TCCGAATAAA GAGGGTTTAA TCAATATTGA ACAACTTTCT
GAAGCTTTTG AAAAAGATAC TTTTCTGGTT AGCGTCATGG CTGCAAATAA TGAGATAGGG
GTTTTGCAAC CTATTGGTGA CATTGGGTCT TTTTGTAAGA GAAAGGGAAT CGCTTTTCAT
TCTGATGCCG CTCAAGCCTT TGGATACTTA GATTTAGACC CCGATAAATT TCGCATTGAT
TTGATGAGTT TGAGTGCTCA CAAAATCTAT GGACCTAAAG GTATTGGGGC TTTGGTGATT
AGGGAAGGAT TCCCTCTTGA ACCCTCTCAA TATGGAGGAG GTCAGGAGCT TGGATTAAGA
TCTGGCACGC TTCCTGTCCC GTTAATTGTT GGCTTTGCAA AGGCAGTCGA AATAACAAAA
AATGATCAGG ATGAGAGGAA CAAGAGACTT TTGTTTTTTA GAAACTTATT GTTGAGTGGA
TTAAAAAAGA ATATTTCTGG ATTGATAGTT AATGGATCTA TTGATCAAAG ATTGCCTCAT
AATCTCAATA TCACTTTCCC TGGCGTGAAG GGAAGTCAAT TGCATGGTCA ATTAAGAAGG
TTTATTTTTT GTACTAGTGG TTCAGCTTGT AGTAATGGTG AAGCTTCTCA TGTTCTGCAG
GAGATAGGGC TCAGCAAAAA AGATGCTGAG GCGTCAATAA GGATGAGTAT TGGGAGAAAT
ACTACGGAGA AAGATATCAA TAAGGCTATT AATATTATTA CGAATATAGT GATTAATCTT
AGACAATAA
 
Protein sequence
MDNNHLIFDF QSSTPCCTKV VEEMAPYWNE LWGNPSNTNN RSGVFASAAV EVSREKIASY 
LNINPKRLIF TSGATEANNL GLVGHARAKA QLIGKPGHII TVSTEHHAVL DPLRQLQKEG
FRLTELHPNK EGLINIEQLS EAFEKDTFLV SVMAANNEIG VLQPIGDIGS FCKRKGIAFH
SDAAQAFGYL DLDPDKFRID LMSLSAHKIY GPKGIGALVI REGFPLEPSQ YGGGQELGLR
SGTLPVPLIV GFAKAVEITK NDQDERNKRL LFFRNLLLSG LKKNISGLIV NGSIDQRLPH
NLNITFPGVK GSQLHGQLRR FIFCTSGSAC SNGEASHVLQ EIGLSKKDAE ASIRMSIGRN
TTEKDINKAI NIITNIVINL RQ